Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.53■□□□□ 0.24
MYCNP04198 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC16.53■□□□□ 0.24
MYCNP04198 PRDM2-214ENST00000505823 568 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC16.53■□□□□ 0.24
MYCNP04198 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC16.53■□□□□ 0.24
MYCNP04198 AC025423.1-201ENST00000544710 374 ntTSL 5 BASIC16.53■□□□□ 0.24
MYCNP04198 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC16.53■□□□□ 0.24
MYCNP04198 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
MYCNP04198 AL132857.1-201ENST00000555180 708 ntBASIC16.53■□□□□ 0.24
MYCNP04198 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 MIR4649-201ENST00000582839 64 ntBASIC16.53■□□□□ 0.24
MYCNP04198 HSP90AB2P-202ENST00000602906 1277 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 AC005632.3-201ENST00000605544 308 ntBASIC16.53■□□□□ 0.24
MYCNP04198 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 REXO1L2P-201ENST00000425429 2069 ntBASIC16.53■□□□□ 0.24
MYCNP04198 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
MYCNP04198 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 AC003102.2-201ENST00000589195 1469 ntBASIC16.53■□□□□ 0.24
MYCNP04198 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.53■□□□□ 0.24
MYCNP04198 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.53■□□□□ 0.24
MYCNP04198 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MYCNP04198 SGO1P1-201ENST00000603525 1447 ntBASIC16.53■□□□□ 0.24
MYCNP04198 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MYCNP04198 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.53■□□□□ 0.24
MYCNP04198 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MYCNP04198 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
MYCNP04198 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.52■□□□□ 0.24
MYCNP04198 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
MYCNP04198 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
MYCNP04198 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MYCNP04198 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
MYCNP04198 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
MYCNP04198 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.52■□□□□ 0.24
MYCNP04198 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MYCNP04198 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MYCNP04198 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.52■□□□□ 0.24
MYCNP04198 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MYCNP04198 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
MYCNP04198 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MYCNP04198 DEFB103A-201ENST00000314357 518 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MYCNP04198 DEFB103B-201ENST00000318124 518 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MYCNP04198 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MYCNP04198 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.52■□□□□ 0.24
MYCNP04198 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.52■□□□□ 0.24
MYCNP04198 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
MYCNP04198 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
MYCNP04198 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MYCNP04198 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
MYCNP04198 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MYCNP04198 AL807761.2-201ENST00000422849 729 ntBASIC16.52■□□□□ 0.24
MYCNP04198 C8orf59P1-201ENST00000429930 303 ntBASIC16.52■□□□□ 0.24
MYCNP04198 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC16.52■□□□□ 0.24
MYCNP04198 AL627422.1-201ENST00000434104 580 ntBASIC16.52■□□□□ 0.24
MYCNP04198 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC16.52■□□□□ 0.24
MYCNP04198 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC16.52■□□□□ 0.24
MYCNP04198 RBMY2AP-201ENST00000445405 1157 ntBASIC16.52■□□□□ 0.24
MYCNP04198 RBMY2CP-201ENST00000448575 1157 ntBASIC16.52■□□□□ 0.24
MYCNP04198 RBMY2DP-202ENST00000448881 1157 ntBASIC16.52■□□□□ 0.24
MYCNP04198 AL161785.1-201ENST00000455981 583 ntTSL 2 BASIC16.52■□□□□ 0.24
MYCNP04198 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC16.52■□□□□ 0.24
MYCNP04198 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.52■□□□□ 0.24
MYCNP04198 AC104982.1-201ENST00000478775 574 ntBASIC16.52■□□□□ 0.24
MYCNP04198 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC16.52■□□□□ 0.24
MYCNP04198 LTV1P1-201ENST00000510683 1237 ntBASIC16.52■□□□□ 0.24
MYCNP04198 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC16.52■□□□□ 0.24
MYCNP04198 TRIQK-213ENST00000521617 774 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
MYCNP04198 AC090539.2-201ENST00000523425 671 ntBASIC16.52■□□□□ 0.24
MYCNP04198 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.52■□□□□ 0.24
MYCNP04198 GLRXP2-201ENST00000555594 321 ntBASIC16.52■□□□□ 0.24
MYCNP04198 WBP1LP5-201ENST00000560907 414 ntBASIC16.52■□□□□ 0.24
MYCNP04198 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC16.52■□□□□ 0.24
MYCNP04198 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.52■□□□□ 0.24
MYCNP04198 AC107464.3-201ENST00000609172 737 ntBASIC16.52■□□□□ 0.24
MYCNP04198 AP000864.1-201ENST00000609424 650 ntBASIC16.52■□□□□ 0.24
MYCNP04198 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC16.52■□□□□ 0.24
MYCNP04198 AC012676.4-201ENST00000616838 582 ntBASIC16.52■□□□□ 0.24
MYCNP04198 C18orf12-201ENST00000623329 537 ntBASIC16.52■□□□□ 0.24
MYCNP04198 AC073911.3-201ENST00000624401 631 ntBASIC16.52■□□□□ 0.24
MYCNP04198 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.52■□□□□ 0.24
MYCNP04198 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC16.52■□□□□ 0.24
MYCNP04198 MBD5-221ENST00000637159 902 ntTSL 5 BASIC16.52■□□□□ 0.24
MYCNP04198 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.52■□□□□ 0.24
MYCNP04198 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MYCNP04198 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.52■□□□□ 0.24
MYCNP04198 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MYCNP04198 AC090616.6-203ENST00000579186 1945 ntBASIC16.52■□□□□ 0.23
MYCNP04198 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.52■□□□□ 0.23
MYCNP04198 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.52■□□□□ 0.23
MYCNP04198 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
MYCNP04198 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MYCNP04198 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
MYCNP04198 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
MYCNP04198 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.52■□□□□ 0.23
MYCNP04198 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.52■□□□□ 0.23
MYCNP04198 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms