Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AGPAT5P1-201ENST00000455855 1019 ntBASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 PTGER4P3-201ENST00000458150 252 ntBASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 AC025594.1-201ENST00000469533 543 ntBASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 AC112250.1-201ENST00000504640 745 ntBASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 SEPHS2P1-201ENST00000511618 1162 ntBASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 AP000920.1-201ENST00000531824 344 ntBASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 AC006548.2-201ENST00000605217 529 ntBASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 DLX4-206ENST00000611342 1662 ntBASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 SLC6A6P1-201ENST00000413933 1850 ntBASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 AC104758.3-203ENST00000562938 2123 ntBASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 AC027612.1-201ENST00000445234 2395 ntBASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 AC012358.2-201ENST00000430010 1434 ntBASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 NUTM2HP-201ENST00000442076 2498 ntBASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 POM121L4P-202ENST00000427789 1891 ntBASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 SIRPB3P-201ENST00000340424 1216 ntBASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 MIR1227-201ENST00000408484 88 ntBASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 NRADDP-201ENST00000437305 691 ntBASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 AL139008.1-201ENST00000437894 228 ntBASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 AC244197.1-201ENST00000456494 951 ntBASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 NDUFB2P1-201ENST00000506966 295 ntBASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 RPS5-204ENST00000598098 536 ntTSL 2 BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMG20BQ9P0W2 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 TBC1D3P1-201ENST00000590047 1693 ntBASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 CICP9-201ENST00000444451 1913 ntBASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 STK16-202ENST00000409260 1493 ntTSL 5 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 SERF2-206ENST00000409291 807 ntTSL 3 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 HNRNPA1P21-201ENST00000424115 961 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms