Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
POLR2J2Q9GZM3 AL031432.4-201ENST00000641729 2190 ntBASIC12.57□□□□□ -0.4
POLR2J2Q9GZM3 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC12.57□□□□□ -0.4
POLR2J2Q9GZM3 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.57□□□□□ -0.4
POLR2J2Q9GZM3 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR2J2Q9GZM3 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
POLR2J2Q9GZM3 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
POLR2J2Q9GZM3 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
POLR2J2Q9GZM3 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR2J2Q9GZM3 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR2J2Q9GZM3 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR2J2Q9GZM3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR2J2Q9GZM3 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
POLR2J2Q9GZM3 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.57□□□□□ -0.4
POLR2J2Q9GZM3 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.57□□□□□ -0.4
POLR2J2Q9GZM3 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 BRWD1P1-201ENST00000401091 371 ntBASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 AP001462.1-201ENST00000594089 452 ntBASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 DDX12P-201ENST00000432996 2947 ntBASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 TEKT4P2-202ENST00000559466 1312 ntBASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.56□□□□□ -0.4
POLR2J2Q9GZM3 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 RBM22P2-201ENST00000393978 1814 ntBASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 BX324167.2-201ENST00000623717 3316 ntBASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 SERF2-206ENST00000409291 807 ntTSL 3 BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 AC016700.1-201ENST00000429424 312 ntBASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 AL353637.1-201ENST00000451571 732 ntBASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 RN7SL258P-201ENST00000478664 300 ntBASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.55□□□□□ -0.4
POLR2J2Q9GZM3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms