Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 AC005722.1-201ENST00000431878 964 ntBASIC11.03□□□□□ -0.64
RAB40CQ96S21 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 CTBP2P5-201ENST00000454986 1264 ntBASIC11.03□□□□□ -0.64
RAB40CQ96S21 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 AC023310.1-201ENST00000554836 735 ntBASIC11.03□□□□□ -0.64
RAB40CQ96S21 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 MIR4687-201ENST00000583618 80 ntBASIC11.03□□□□□ -0.64
RAB40CQ96S21 AC008805.1-201ENST00000590892 364 ntBASIC11.03□□□□□ -0.64
RAB40CQ96S21 AL591926.3-201ENST00000611630 238 ntBASIC11.03□□□□□ -0.64
RAB40CQ96S21 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC11.03□□□□□ -0.64
RAB40CQ96S21 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB40CQ96S21 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RAB40CQ96S21 CSPG4P13-202ENST00000567704 4801 ntBASIC11.02□□□□□ -0.64
RAB40CQ96S21 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC11.02□□□□□ -0.64
RAB40CQ96S21 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RAB40CQ96S21 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RAB40CQ96S21 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC11.02□□□□□ -0.64
RAB40CQ96S21 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RAB40CQ96S21 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RAB40CQ96S21 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RAB40CQ96S21 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC11.02□□□□□ -0.64
RAB40CQ96S21 HERC2P9-206ENST00000529624 5187 ntBASIC11.02□□□□□ -0.64
RAB40CQ96S21 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
RAB40CQ96S21 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC11.02□□□□□ -0.64
RAB40CQ96S21 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 POM121L7P-201ENST00000329949 2404 ntBASIC11.02□□□□□ -0.65
RAB40CQ96S21 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 PGF-202ENST00000405431 666 ntTSL 5 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 AL354877.1-201ENST00000424412 413 ntBASIC11.02□□□□□ -0.65
RAB40CQ96S21 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 U91328.1-201ENST00000437528 223 ntBASIC11.02□□□□□ -0.65
RAB40CQ96S21 GPR53P-205ENST00000457298 1084 ntBASIC11.02□□□□□ -0.65
RAB40CQ96S21 TUBB8P8-201ENST00000458717 1058 ntBASIC11.02□□□□□ -0.65
RAB40CQ96S21 RN7SL277P-201ENST00000481521 288 ntBASIC11.02□□□□□ -0.65
RAB40CQ96S21 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 AC005740.1-201ENST00000515639 522 ntBASIC11.02□□□□□ -0.65
RAB40CQ96S21 SCARNA21-201ENST00000517026 139 ntBASIC11.02□□□□□ -0.65
RAB40CQ96S21 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms