Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PROM2Q8N271 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PROM2Q8N271 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PROM2Q8N271 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC17.1■□□□□ 0.33
PROM2Q8N271 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.09■□□□□ 0.33
PROM2Q8N271 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC17.09■□□□□ 0.33
PROM2Q8N271 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.09■□□□□ 0.33
PROM2Q8N271 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.09■□□□□ 0.33
PROM2Q8N271 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.09■□□□□ 0.33
PROM2Q8N271 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC17.09■□□□□ 0.33
PROM2Q8N271 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC17.09■□□□□ 0.33
PROM2Q8N271 AC096677.3-201ENST00000413162 387 ntBASIC17.09■□□□□ 0.33
PROM2Q8N271 RPL21P135-201ENST00000442539 791 ntBASIC17.09■□□□□ 0.33
PROM2Q8N271 DIS3L2P1-201ENST00000509197 559 ntBASIC17.09■□□□□ 0.33
PROM2Q8N271 AC092284.1-201ENST00000511386 1289 ntBASIC17.09■□□□□ 0.33
PROM2Q8N271 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 AC025437.4-201ENST00000522975 681 ntTSL 3 BASIC17.09■□□□□ 0.33
PROM2Q8N271 AC018868.2-201ENST00000559655 1259 ntBASIC17.09■□□□□ 0.33
PROM2Q8N271 SNORD55-201ENST00000581525 80 ntBASIC17.09■□□□□ 0.33
PROM2Q8N271 AC022966.2-201ENST00000587434 367 ntBASIC17.09■□□□□ 0.33
PROM2Q8N271 VN1R87P-201ENST00000596706 487 ntBASIC17.09■□□□□ 0.33
PROM2Q8N271 CLIC1-210ENST00000616760 1098 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PROM2Q8N271 AC007274.3-201ENST00000619838 385 ntBASIC17.09■□□□□ 0.33
PROM2Q8N271 AC138430.2-201ENST00000624068 504 ntBASIC17.09■□□□□ 0.33
PROM2Q8N271 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 AL356583.1-201ENST00000398739 1371 ntBASIC17.09■□□□□ 0.33
PROM2Q8N271 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
PROM2Q8N271 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC17.09■□□□□ 0.33
PROM2Q8N271 AP001267.2-201ENST00000532619 2086 ntBASIC17.09■□□□□ 0.33
PROM2Q8N271 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC17.09■□□□□ 0.33
PROM2Q8N271 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.09■□□□□ 0.33
PROM2Q8N271 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
PROM2Q8N271 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PROM2Q8N271 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PROM2Q8N271 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PROM2Q8N271 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC17.08■□□□□ 0.33
PROM2Q8N271 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PROM2Q8N271 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PROM2Q8N271 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.08■□□□□ 0.33
PROM2Q8N271 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PROM2Q8N271 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PROM2Q8N271 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PROM2Q8N271 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PROM2Q8N271 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.32
PROM2Q8N271 ERG-211ENST00000453032 1595 ntTSL 2 BASIC17.08■□□□□ 0.32
PROM2Q8N271 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC17.08■□□□□ 0.32
PROM2Q8N271 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PROM2Q8N271 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PROM2Q8N271 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PROM2Q8N271 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC17.08■□□□□ 0.32
PROM2Q8N271 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC17.08■□□□□ 0.32
PROM2Q8N271 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PROM2Q8N271 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC17.08■□□□□ 0.32
PROM2Q8N271 EEF1GP3-201ENST00000421044 1288 ntBASIC17.08■□□□□ 0.32
PROM2Q8N271 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC17.08■□□□□ 0.32
PROM2Q8N271 RSL24D1P8-201ENST00000434442 492 ntBASIC17.08■□□□□ 0.32
PROM2Q8N271 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PROM2Q8N271 AC048382.1-201ENST00000542197 1018 ntTSL 5 BASIC17.08■□□□□ 0.32
PROM2Q8N271 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC17.08■□□□□ 0.32
PROM2Q8N271 AC009269.2-201ENST00000559892 474 ntBASIC17.08■□□□□ 0.32
PROM2Q8N271 IGHV3OR16-11-201ENST00000565524 349 ntBASIC17.08■□□□□ 0.32
PROM2Q8N271 DNM1P50-201ENST00000565767 508 ntBASIC17.08■□□□□ 0.32
PROM2Q8N271 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC17.08■□□□□ 0.32
PROM2Q8N271 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PROM2Q8N271 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC17.08■□□□□ 0.32
PROM2Q8N271 MIR378I-201ENST00000582688 76 ntBASIC17.08■□□□□ 0.32
PROM2Q8N271 AC090772.3-201ENST00000583267 735 ntTSL 3 BASIC17.08■□□□□ 0.32
PROM2Q8N271 SUZ12P1-207ENST00000583950 741 ntTSL 5 BASIC17.08■□□□□ 0.32
PROM2Q8N271 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC17.08■□□□□ 0.32
PROM2Q8N271 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC17.08■□□□□ 0.32
PROM2Q8N271 AC090772.4-201ENST00000623599 362 ntBASIC17.08■□□□□ 0.32
PROM2Q8N271 AP006621.5-202ENST00000623692 636 ntBASIC17.08■□□□□ 0.32
PROM2Q8N271 MIR941-1-201ENST00000636396 72 ntBASIC17.08■□□□□ 0.32
PROM2Q8N271 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PROM2Q8N271 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PROM2Q8N271 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PROM2Q8N271 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PROM2Q8N271 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PROM2Q8N271 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PROM2Q8N271 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PROM2Q8N271 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC17.08■□□□□ 0.32
PROM2Q8N271 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms