Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
O00370 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
O00370 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
O00370 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
O00370 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
O00370 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
O00370 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
O00370 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
O00370 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.44□□□□□ -0.1
O00370 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
O00370 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
O00370 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
O00370 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
O00370 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
O00370 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
O00370 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
O00370 CFL1P6-201ENST00000400899 494 ntBASIC14.44□□□□□ -0.1
O00370 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC14.44□□□□□ -0.1
O00370 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
O00370 AC103563.1-201ENST00000429316 123 ntBASIC14.44□□□□□ -0.1
O00370 LYPLA2P1-203ENST00000447689 696 ntBASIC14.44□□□□□ -0.1
O00370 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC14.44□□□□□ -0.1
O00370 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC14.44□□□□□ -0.1
O00370 RN7SL23P-201ENST00000484055 275 ntBASIC14.44□□□□□ -0.1
O00370 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.44□□□□□ -0.1
O00370 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
O00370 MT3-202ENST00000561640 514 ntTSL 3 BASIC14.44□□□□□ -0.1
O00370 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.44□□□□□ -0.1
O00370 MIR4649-201ENST00000582839 64 ntBASIC14.44□□□□□ -0.1
O00370 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.44□□□□□ -0.1
O00370 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
O00370 MIR6858-201ENST00000620733 67 ntBASIC14.44□□□□□ -0.1
O00370 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC14.44□□□□□ -0.1
O00370 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC14.44□□□□□ -0.1
O00370 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.44□□□□□ -0.1
O00370 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
O00370 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
O00370 HNRNPLP1-201ENST00000421896 1501 ntBASIC14.44□□□□□ -0.1
O00370 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
O00370 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
O00370 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
O00370 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
O00370 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC14.44□□□□□ -0.1
O00370 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
O00370 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
O00370 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
O00370 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
O00370 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.44□□□□□ -0.1
O00370 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
O00370 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC14.43□□□□□ -0.1
O00370 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
O00370 GUCY2EP-203ENST00000531117 1918 ntBASIC14.43□□□□□ -0.1
O00370 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC14.43□□□□□ -0.1
O00370 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
O00370 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC14.43□□□□□ -0.1
O00370 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.43□□□□□ -0.1
O00370 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.43□□□□□ -0.1
O00370 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC14.43□□□□□ -0.1
O00370 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC14.43□□□□□ -0.1
O00370 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC14.43□□□□□ -0.1
O00370 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC14.43□□□□□ -0.1
O00370 OR2A1-AS1-210ENST00000496968 531 ntBASIC14.43□□□□□ -0.1
O00370 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC14.43□□□□□ -0.1
O00370 COX5A-205ENST00000568517 582 ntTSL 3 BASIC14.43□□□□□ -0.1
O00370 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.43□□□□□ -0.1
O00370 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC14.43□□□□□ -0.1
O00370 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 POM121L4P-202ENST00000427789 1891 ntBASIC14.43□□□□□ -0.1
O00370 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
O00370 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
O00370 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
O00370 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC14.43□□□□□ -0.1
O00370 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
O00370 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
O00370 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
O00370 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms