Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 HNRNPA1P2-207ENST00000432375 960 ntBASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 AL031673.1-201ENST00000611460 466 ntBASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 HPX-213ENST00000615166 826 ntTSL 5 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 AC009560.1-201ENST00000620208 434 ntBASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 AC009145.4-201ENST00000625119 1294 ntBASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 CDK7-214ENST00000626796 358 ntTSL 5 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 API5-208ENST00000531273 1868 ntTSL 2 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 LPO-204ENST00000543544 2350 ntTSL 2 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 AC040160.2-201ENST00000623816 1675 ntBASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 AC006372.4-201ENST00000624122 1543 ntBASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 CARS-214ENST00000529772 2637 ntTSL 2 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 MSNP1-201ENST00000511640 1732 ntBASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 AC090114.2-201ENST00000608477 7054 ntBASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 AC015819.3-201ENST00000624305 2674 ntBASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 LINC00638-201ENST00000555578 2518 ntBASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 AL512306.1-201ENST00000432698 848 ntBASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 AC138701.2-201ENST00000553634 226 ntBASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 MIR4326-201ENST00000582203 59 ntBASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 AP005264.5-201ENST00000590066 467 ntBASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 AL049840.2-201ENST00000602722 535 ntBASIC10.28□□□□□ -0.76
HLA-DRB4X5D2U9 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms