Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PTF1AQ7RTS3 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTF1AQ7RTS3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PTF1AQ7RTS3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTF1AQ7RTS3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTF1AQ7RTS3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTF1AQ7RTS3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
PTF1AQ7RTS3 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC16.84■□□□□ 0.29
PTF1AQ7RTS3 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
PTF1AQ7RTS3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
PTF1AQ7RTS3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
PTF1AQ7RTS3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.83■□□□□ 0.29
PTF1AQ7RTS3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PTF1AQ7RTS3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PTF1AQ7RTS3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 PRSS3-203ENST00000379405 834 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 HNRNPA1P19-201ENST00000405292 370 ntBASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 PRADC1P1-201ENST00000412317 525 ntBASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 HNRNPA1P33-201ENST00000421426 561 ntBASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 DNASE1L3-207ENST00000486455 1321 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 ZBED3-AS1-206ENST00000508401 582 ntTSL 2 BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 SLC25A5P6-201ENST00000515328 886 ntBASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 AC080023.2-201ENST00000532615 208 ntBASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 AC133548.2-202ENST00000562267 148 ntBASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 AC127537.3-201ENST00000566532 749 ntBASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 AC244102.2-201ENST00000597568 955 ntBASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.83■□□□□ 0.28
PTF1AQ7RTS3 STK3-218ENST00000617590 2485 ntTSL 5 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 BEND3P1-201ENST00000421591 1944 ntBASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 SLC6A6P1-201ENST00000413933 1850 ntBASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 ZNF493-208ENST00000599461 1769 ntBASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 ACVR1C-202ENST00000335450 1501 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 PPATP1-201ENST00000496669 1547 ntBASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 FAM90A22P-201ENST00000400142 1395 ntBASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 AC007322.2-201ENST00000414540 605 ntBASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 RPSAP46-201ENST00000428316 882 ntBASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 PSMD6-209ENST00000482510 1176 ntTSL 5 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 RPL18P1-201ENST00000497218 552 ntBASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 ORMDL2-204ENST00000550836 438 ntTSL 3 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 SLIRP-209ENST00000557342 408 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 SLIRP-211ENST00000557623 865 ntTSL 2 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 AL031058.1-201ENST00000561592 888 ntBASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 AL356423.1-201ENST00000604953 538 ntBASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 FAM92B-203ENST00000629253 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PTF1AQ7RTS3 NNMT-201ENST00000299964 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 DTX2P1-201ENST00000425797 1633 ntBASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms