Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC092301.1-201ENST00000601618 764 ntTSL 5 BASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 LINC02348-201ENST00000618724 489 ntTSL 4 BASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 ACVR1C-202ENST00000335450 1501 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 AL133464.1-205ENST00000634595 1535 ntTSL 5 BASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 AOC4P-203ENST00000566825 2289 ntBASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CDC42BPAQ5VT25 AC104590.1-202ENST00000558368 1921 ntBASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 AC136475.6-201ENST00000533113 289 ntBASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 AL589843.2-202ENST00000602289 740 ntBASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 MIR6871-201ENST00000613433 56 ntBASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 FP671120.4-201ENST00000629969 923 ntBASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 KCNAB1-203ENST00000389636 1806 ntTSL 2 BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 AC004585.2-201ENST00000624090 1473 ntBASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 AC006262.1-201ENST00000593980 1316 ntTSL 5 BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC19.57■□□□□ 0.72
CDC42BPAQ5VT25 CHMP2A-201ENST00000312547 913 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 OR52X1P-201ENST00000446117 914 ntBASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 HLA-DRB9-201ENST00000449413 343 ntBASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 AC023886.1-202ENST00000504009 477 ntTSL 3 BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 OR7E14P-201ENST00000526721 1000 ntBASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 AP001453.2-201ENST00000544553 391 ntTSL 2 BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 CHMP2A-206ENST00000600118 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 OR6D1P-202ENST00000641007 5290 ntBASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 VENTXP1-201ENST00000569334 2716 ntBASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 PRKCE-202ENST00000394874 996 ntTSL 3 BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 MRPS16P3-201ENST00000415961 374 ntBASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 OR10V2P-201ENST00000525296 764 ntBASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 TRIAP1-202ENST00000546954 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 AC015912.3-201ENST00000619432 348 ntBASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 AC004951.1-201ENST00000447643 1866 ntTSL 2 BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 AC073548.1-201ENST00000624088 1882 ntBASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC42BPAQ5VT25 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 AC130686.1-201ENST00000622936 2466 ntBASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 CD300LB-201ENST00000314401 993 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 HNRNPABP1-201ENST00000406003 734 ntBASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 AC010240.1-201ENST00000429606 459 ntBASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 C10orf71-AS1-201ENST00000437677 753 ntTSL 2 BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 AC007405.2-203ENST00000455988 547 ntTSL 4 BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC42BPAQ5VT25 OR7E26P-201ENST00000502808 1006 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms