Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PSMD6-209ENST00000482510 1176 ntTSL 5 BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 MTND6P4-201ENST00000506002 522 ntBASIC16.6■□□□□ 0.25
RC3H1Q5TC82 OR5BA1P-201ENST00000529722 982 ntBASIC16.6■□□□□ 0.25
RC3H1Q5TC82 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 AC007450.4-201ENST00000614709 524 ntBASIC16.6■□□□□ 0.25
RC3H1Q5TC82 AP006621.5-202ENST00000623692 636 ntBASIC16.6■□□□□ 0.25
RC3H1Q5TC82 AC138430.2-201ENST00000624068 504 ntBASIC16.6■□□□□ 0.25
RC3H1Q5TC82 AC099552.4-201ENST00000624248 949 ntBASIC16.6■□□□□ 0.25
RC3H1Q5TC82 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 NORAD-201ENST00000565493 5339 ntBASIC16.6■□□□□ 0.25
RC3H1Q5TC82 TMEM106A-204ENST00000588659 1437 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 AL022323.5-201ENST00000624101 2059 ntBASIC16.6■□□□□ 0.25
RC3H1Q5TC82 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 TPM3P7-201ENST00000338274 732 ntBASIC16.59■□□□□ 0.25
RC3H1Q5TC82 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 AC138392.1-201ENST00000427577 921 ntBASIC16.59■□□□□ 0.25
RC3H1Q5TC82 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 P2RX6P-202ENST00000450626 357 ntBASIC16.59■□□□□ 0.25
RC3H1Q5TC82 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 MIR6871-201ENST00000613433 56 ntBASIC16.59■□□□□ 0.25
RC3H1Q5TC82 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 AC073585.1-201ENST00000368895 1328 ntBASIC16.59■□□□□ 0.25
RC3H1Q5TC82 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 AC005154.3-201ENST00000419639 1393 ntBASIC16.59■□□□□ 0.25
RC3H1Q5TC82 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RC3H1Q5TC82 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.58■□□□□ 0.25
RC3H1Q5TC82 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
RC3H1Q5TC82 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RC3H1Q5TC82 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.58■□□□□ 0.25
RC3H1Q5TC82 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RC3H1Q5TC82 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
RC3H1Q5TC82 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RC3H1Q5TC82 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RC3H1Q5TC82 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
RC3H1Q5TC82 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RC3H1Q5TC82 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RC3H1Q5TC82 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.58■□□□□ 0.25
RC3H1Q5TC82 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
RC3H1Q5TC82 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 TOMM5-202ENST00000377773 808 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 KRTAP9-10P-201ENST00000435672 207 ntBASIC16.58■□□□□ 0.24
RC3H1Q5TC82 AC140481.1-202ENST00000436488 525 ntTSL 2 BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 AC098934.2-202ENST00000438944 1033 ntBASIC16.58■□□□□ 0.24
RC3H1Q5TC82 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 AC106748.1-201ENST00000454801 384 ntBASIC16.58■□□□□ 0.24
RC3H1Q5TC82 EEF1GP1-201ENST00000457231 1299 ntBASIC16.58■□□□□ 0.24
RC3H1Q5TC82 AC007622.1-201ENST00000488371 535 ntBASIC16.58■□□□□ 0.24
RC3H1Q5TC82 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 SALL1-204ENST00000566102 565 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 RN7SL5P-201ENST00000581458 321 ntBASIC16.58■□□□□ 0.24
RC3H1Q5TC82 FAM223B-202ENST00000598177 713 ntBASIC16.58■□□□□ 0.24
RC3H1Q5TC82 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC16.58■□□□□ 0.24
RC3H1Q5TC82 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms