Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CD37-203ENST00000426897 1204 ntTSL 2 BASIC12.14□□□□□ -0.47
ZIC3O60481 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC12.14□□□□□ -0.47
ZIC3O60481 RPSAP12-201ENST00000435879 888 ntBASIC12.14□□□□□ -0.47
ZIC3O60481 RPE-208ENST00000436630 1128 ntTSL 2 BASIC12.14□□□□□ -0.47
ZIC3O60481 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC12.14□□□□□ -0.47
ZIC3O60481 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 ALG1L7P-201ENST00000502317 768 ntBASIC12.14□□□□□ -0.47
ZIC3O60481 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC12.14□□□□□ -0.47
ZIC3O60481 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC12.14□□□□□ -0.47
ZIC3O60481 AP000920.1-201ENST00000531824 344 ntBASIC12.14□□□□□ -0.47
ZIC3O60481 AC092862.1-201ENST00000541534 533 ntBASIC12.14□□□□□ -0.47
ZIC3O60481 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ZIC3O60481 SRP14-204ENST00000558720 780 ntTSL 2 BASIC12.14□□□□□ -0.47
ZIC3O60481 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
ZIC3O60481 RN7SL162P-201ENST00000579233 292 ntBASIC12.14□□□□□ -0.47
ZIC3O60481 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC12.14□□□□□ -0.47
ZIC3O60481 TYMSP2-201ENST00000589501 424 ntBASIC12.14□□□□□ -0.47
ZIC3O60481 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC12.14□□□□□ -0.47
ZIC3O60481 URAHP-205ENST00000610227 398 ntBASIC12.14□□□□□ -0.47
ZIC3O60481 RARS-210ENST00000626454 177 ntTSL 5 BASIC12.14□□□□□ -0.47
ZIC3O60481 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.14□□□□□ -0.47
ZIC3O60481 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ZIC3O60481 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
ZIC3O60481 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.14□□□□□ -0.47
ZIC3O60481 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ZIC3O60481 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC12.14□□□□□ -0.47
ZIC3O60481 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ZIC3O60481 AC019294.4-201ENST00000561777 2905 ntBASIC12.14□□□□□ -0.47
ZIC3O60481 AC026271.4-201ENST00000578214 1833 ntBASIC12.14□□□□□ -0.47
ZIC3O60481 PTN-202ENST00000393083 1599 ntTSL 5 BASIC12.13□□□□□ -0.47
ZIC3O60481 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC12.13□□□□□ -0.47
ZIC3O60481 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 AL445209.1-201ENST00000607269 3491 ntBASIC12.13□□□□□ -0.47
ZIC3O60481 KRT8P38-201ENST00000441370 1430 ntBASIC12.13□□□□□ -0.47
ZIC3O60481 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
ZIC3O60481 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
ZIC3O60481 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
ZIC3O60481 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC12.13□□□□□ -0.47
ZIC3O60481 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
ZIC3O60481 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
ZIC3O60481 SURF4-203ENST00000371991 715 ntTSL 3 BASIC12.13□□□□□ -0.47
ZIC3O60481 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC12.13□□□□□ -0.47
ZIC3O60481 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 HLA-DMA-202ENST00000395303 1007 ntBASIC12.13□□□□□ -0.47
ZIC3O60481 MPV17-209ENST00000405983 859 ntTSL 5 BASIC12.13□□□□□ -0.47
ZIC3O60481 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
ZIC3O60481 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC12.13□□□□□ -0.47
ZIC3O60481 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC12.13□□□□□ -0.47
ZIC3O60481 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 AL080243.1-201ENST00000423293 1060 ntBASIC12.13□□□□□ -0.47
ZIC3O60481 PSMD4P1-201ENST00000433951 1109 ntBASIC12.13□□□□□ -0.47
ZIC3O60481 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 VENTXP4-201ENST00000449029 958 ntBASIC12.13□□□□□ -0.47
ZIC3O60481 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
ZIC3O60481 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC12.13□□□□□ -0.47
ZIC3O60481 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC12.13□□□□□ -0.47
ZIC3O60481 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC12.13□□□□□ -0.47
ZIC3O60481 FAM213AP2-201ENST00000521579 683 ntBASIC12.13□□□□□ -0.47
ZIC3O60481 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC12.13□□□□□ -0.47
ZIC3O60481 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 AC026304.1-201ENST00000597953 561 ntBASIC12.13□□□□□ -0.47
ZIC3O60481 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC12.13□□□□□ -0.47
ZIC3O60481 AP000769.1-203ENST00000637245 208 ntBASIC12.13□□□□□ -0.47
ZIC3O60481 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 AC005154.3-201ENST00000419639 1393 ntBASIC12.13□□□□□ -0.47
ZIC3O60481 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.13□□□□□ -0.47
ZIC3O60481 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZIC3O60481 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms