Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 AC092506.1-202ENST00000401022 528 ntBASIC11.94□□□□□ -0.5
NPIPB4C9JG80 RN7SKP102-201ENST00000411186 315 ntBASIC11.94□□□□□ -0.5
NPIPB4C9JG80 BCYRN1-201ENST00000418539 200 ntBASIC11.94□□□□□ -0.5
NPIPB4C9JG80 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 AC092638.2-201ENST00000441105 947 ntBASIC11.94□□□□□ -0.5
NPIPB4C9JG80 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 AC104212.2-201ENST00000478813 628 ntBASIC11.94□□□□□ -0.5
NPIPB4C9JG80 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 TMCO5B-205ENST00000530020 894 ntBASIC11.94□□□□□ -0.5
NPIPB4C9JG80 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 JAML-211ENST00000533261 1508 ntTSL 5 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 AC107375.1-201ENST00000564464 2231 ntBASIC11.94□□□□□ -0.5
NPIPB4C9JG80 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 MPPE1-204ENST00000344987 1831 ntTSL 5 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 UFM1-202ENST00000379649 846 ntTSL 4 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 DMKN-203ENST00000402589 935 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 NOC2LP1-201ENST00000450578 752 ntBASIC11.93□□□□□ -0.5
NPIPB4C9JG80 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 OR2A1-AS1-210ENST00000496968 531 ntBASIC11.93□□□□□ -0.5
NPIPB4C9JG80 RPL29P2-202ENST00000498671 657 ntBASIC11.93□□□□□ -0.5
NPIPB4C9JG80 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 PRKXP1-201ENST00000561423 1122 ntBASIC11.93□□□□□ -0.5
NPIPB4C9JG80 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 RN7SL162P-201ENST00000579233 292 ntBASIC11.93□□□□□ -0.5
NPIPB4C9JG80 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 AL136982.5-201ENST00000605222 294 ntBASIC11.93□□□□□ -0.5
NPIPB4C9JG80 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms