Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC091804.1-201ENST00000486888 567 ntBASIC12.68□□□□□ -0.38
HPS1Q92902 MTND3P3-201ENST00000505004 126 ntBASIC12.68□□□□□ -0.38
HPS1Q92902 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.68□□□□□ -0.38
HPS1Q92902 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.68□□□□□ -0.38
HPS1Q92902 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.68□□□□□ -0.38
HPS1Q92902 AC020656.1-201ENST00000548900 599 ntTSL 3 BASIC12.68□□□□□ -0.38
HPS1Q92902 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC12.68□□□□□ -0.38
HPS1Q92902 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC12.68□□□□□ -0.38
HPS1Q92902 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
HPS1Q92902 AP006547.1-201ENST00000563435 692 ntBASIC12.68□□□□□ -0.38
HPS1Q92902 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.68□□□□□ -0.38
HPS1Q92902 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HPS1Q92902 AC104982.3-201ENST00000581995 514 ntBASIC12.68□□□□□ -0.38
HPS1Q92902 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.68□□□□□ -0.38
HPS1Q92902 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.68□□□□□ -0.38
HPS1Q92902 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HPS1Q92902 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.68□□□□□ -0.38
HPS1Q92902 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HPS1Q92902 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.68□□□□□ -0.38
HPS1Q92902 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.68□□□□□ -0.38
HPS1Q92902 ECM1P1-201ENST00000604092 1279 ntBASIC12.68□□□□□ -0.38
HPS1Q92902 AL034374.2-201ENST00000605281 548 ntBASIC12.68□□□□□ -0.38
HPS1Q92902 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.68□□□□□ -0.38
HPS1Q92902 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.68□□□□□ -0.38
HPS1Q92902 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HPS1Q92902 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.68□□□□□ -0.38
HPS1Q92902 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HPS1Q92902 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC12.68□□□□□ -0.38
HPS1Q92902 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HPS1Q92902 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HPS1Q92902 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC12.68□□□□□ -0.38
HPS1Q92902 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HPS1Q92902 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HPS1Q92902 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HPS1Q92902 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HPS1Q92902 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HPS1Q92902 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HPS1Q92902 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.68□□□□□ -0.38
HPS1Q92902 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HPS1Q92902 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HPS1Q92902 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.68□□□□□ -0.38
HPS1Q92902 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HPS1Q92902 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
HPS1Q92902 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
HPS1Q92902 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
HPS1Q92902 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC12.67□□□□□ -0.38
HPS1Q92902 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
HPS1Q92902 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 AC138028.6-201ENST00000616106 1482 ntBASIC12.67□□□□□ -0.38
HPS1Q92902 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC12.67□□□□□ -0.38
HPS1Q92902 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC12.67□□□□□ -0.38
HPS1Q92902 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 AL359845.1-201ENST00000458202 1648 ntBASIC12.67□□□□□ -0.38
HPS1Q92902 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC12.67□□□□□ -0.38
HPS1Q92902 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC12.67□□□□□ -0.38
HPS1Q92902 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 NTM-206ENST00000427481 2583 ntTSL 5 BASIC12.67□□□□□ -0.38
HPS1Q92902 CSPG4P13-202ENST00000567704 4801 ntBASIC12.67□□□□□ -0.38
HPS1Q92902 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.67□□□□□ -0.38
HPS1Q92902 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
HPS1Q92902 POM121L8P-201ENST00000417732 1281 ntBASIC12.67□□□□□ -0.38
HPS1Q92902 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.67□□□□□ -0.38
HPS1Q92902 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.67□□□□□ -0.38
HPS1Q92902 POM121L10P-201ENST00000436994 1285 ntBASIC12.67□□□□□ -0.38
HPS1Q92902 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 POM121L9P-203ENST00000441984 1285 ntBASIC12.67□□□□□ -0.38
HPS1Q92902 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.67□□□□□ -0.38
HPS1Q92902 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.67□□□□□ -0.38
HPS1Q92902 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 MESTP3-201ENST00000503460 968 ntBASIC12.67□□□□□ -0.38
HPS1Q92902 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.67□□□□□ -0.38
HPS1Q92902 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.67□□□□□ -0.38
HPS1Q92902 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.67□□□□□ -0.38
HPS1Q92902 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.67□□□□□ -0.38
HPS1Q92902 AC005695.3-201ENST00000614522 232 ntBASIC12.67□□□□□ -0.38
HPS1Q92902 AC138466.3-201ENST00000619983 221 ntBASIC12.67□□□□□ -0.38
HPS1Q92902 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 DBIL5P-203ENST00000536214 2677 ntBASIC12.67□□□□□ -0.38
HPS1Q92902 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.67□□□□□ -0.38
HPS1Q92902 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.67□□□□□ -0.38
HPS1Q92902 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.67□□□□□ -0.38
HPS1Q92902 PKP4P1-201ENST00000426801 2158 ntBASIC12.67□□□□□ -0.38
HPS1Q92902 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms