Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S1Q92572 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
AP3S1Q92572 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.98□□□□□ -0.49
AP3S1Q92572 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC11.98□□□□□ -0.49
AP3S1Q92572 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S1Q92572 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC11.98□□□□□ -0.49
AP3S1Q92572 POLD4-211ENST00000539074 714 ntTSL 3 BASIC11.98□□□□□ -0.49
AP3S1Q92572 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
AP3S1Q92572 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S1Q92572 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
AP3S1Q92572 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC11.98□□□□□ -0.49
AP3S1Q92572 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC11.98□□□□□ -0.49
AP3S1Q92572 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC11.98□□□□□ -0.49
AP3S1Q92572 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S1Q92572 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC11.98□□□□□ -0.49
AP3S1Q92572 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC11.98□□□□□ -0.49
AP3S1Q92572 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC11.98□□□□□ -0.49
AP3S1Q92572 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC11.98□□□□□ -0.49
AP3S1Q92572 AC073413.1-201ENST00000603927 732 ntBASIC11.98□□□□□ -0.49
AP3S1Q92572 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.98□□□□□ -0.49
AP3S1Q92572 AC133540.1-201ENST00000620845 1019 ntBASIC11.98□□□□□ -0.49
AP3S1Q92572 AC006453.4-201ENST00000636949 1252 ntBASIC11.98□□□□□ -0.49
AP3S1Q92572 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S1Q92572 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S1Q92572 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S1Q92572 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
AP3S1Q92572 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S1Q92572 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
AP3S1Q92572 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S1Q92572 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S1Q92572 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC11.98□□□□□ -0.49
AP3S1Q92572 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S1Q92572 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC11.98□□□□□ -0.49
AP3S1Q92572 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC11.98□□□□□ -0.49
AP3S1Q92572 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
AP3S1Q92572 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S1Q92572 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC11.97□□□□□ -0.49
AP3S1Q92572 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC11.97□□□□□ -0.49
AP3S1Q92572 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 STAG1-203ENST00000434713 5064 ntTSL 5 BASIC11.97□□□□□ -0.49
AP3S1Q92572 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC11.97□□□□□ -0.49
AP3S1Q92572 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC11.97□□□□□ -0.49
AP3S1Q92572 RCC2P5-201ENST00000492126 1487 ntBASIC11.97□□□□□ -0.49
AP3S1Q92572 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
AP3S1Q92572 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
AP3S1Q92572 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC11.97□□□□□ -0.49
AP3S1Q92572 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC11.97□□□□□ -0.49
AP3S1Q92572 KCNA4-201ENST00000328224 4172 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 AL391825.1-201ENST00000457671 1364 ntBASIC11.97□□□□□ -0.49
AP3S1Q92572 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC11.97□□□□□ -0.49
AP3S1Q92572 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
AP3S1Q92572 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC11.97□□□□□ -0.49
AP3S1Q92572 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
AP3S1Q92572 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC11.97□□□□□ -0.49
AP3S1Q92572 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC11.97□□□□□ -0.49
AP3S1Q92572 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC11.97□□□□□ -0.49
AP3S1Q92572 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.97□□□□□ -0.49
AP3S1Q92572 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.97□□□□□ -0.49
AP3S1Q92572 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC11.97□□□□□ -0.49
AP3S1Q92572 UPF3AP3-201ENST00000420996 769 ntBASIC11.97□□□□□ -0.49
AP3S1Q92572 DFFBP1-201ENST00000433250 979 ntBASIC11.97□□□□□ -0.49
AP3S1Q92572 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC11.97□□□□□ -0.49
AP3S1Q92572 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC11.97□□□□□ -0.49
AP3S1Q92572 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.97□□□□□ -0.49
AP3S1Q92572 PTP4A1P2-201ENST00000546033 454 ntBASIC11.97□□□□□ -0.49
AP3S1Q92572 CMC2-204ENST00000562713 573 ntTSL 3 BASIC11.97□□□□□ -0.49
AP3S1Q92572 CMC2-209ENST00000565108 399 ntTSL 2 BASIC11.97□□□□□ -0.49
AP3S1Q92572 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC11.97□□□□□ -0.49
AP3S1Q92572 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC11.97□□□□□ -0.49
AP3S1Q92572 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.97□□□□□ -0.49
AP3S1Q92572 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC11.97□□□□□ -0.49
AP3S1Q92572 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC11.97□□□□□ -0.49
AP3S1Q92572 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC11.97□□□□□ -0.49
AP3S1Q92572 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
AP3S1Q92572 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
AP3S1Q92572 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S1Q92572 AL031587.5-201ENST00000624344 1849 ntBASIC11.97□□□□□ -0.49
AP3S1Q92572 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms