Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 FUK-202ENST00000378912 3925 ntTSL 2 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 VENTXP1-201ENST00000569334 2716 ntBASIC20.68■□□□□ 0.9
VPS8Q8N3P4 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 PRADC1P1-201ENST00000412317 525 ntBASIC20.68■□□□□ 0.9
VPS8Q8N3P4 AP000346.2-202ENST00000425948 383 ntBASIC20.68■□□□□ 0.9
VPS8Q8N3P4 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 AC105443.1-201ENST00000433754 712 ntBASIC20.68■□□□□ 0.9
VPS8Q8N3P4 YBX1P3-201ENST00000468366 909 ntBASIC20.68■□□□□ 0.9
VPS8Q8N3P4 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 AC092535.4-201ENST00000609548 397 ntBASIC20.68■□□□□ 0.9
VPS8Q8N3P4 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC20.68■□□□□ 0.9
VPS8Q8N3P4 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS8Q8N3P4 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 MAGED2-205ENST00000375060 1798 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 SSR4P1-201ENST00000415143 412 ntBASIC20.67■□□□□ 0.9
VPS8Q8N3P4 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 AC113347.2-201ENST00000512350 279 ntBASIC20.67■□□□□ 0.9
VPS8Q8N3P4 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 AL590235.1-201ENST00000564650 861 ntBASIC20.67■□□□□ 0.9
VPS8Q8N3P4 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 RN7SL678P-201ENST00000579533 299 ntBASIC20.67■□□□□ 0.9
VPS8Q8N3P4 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC20.67■□□□□ 0.9
VPS8Q8N3P4 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 YAP1P1-201ENST00000401504 1393 ntBASIC20.67■□□□□ 0.9
VPS8Q8N3P4 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS8Q8N3P4 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 AC026271.1-201ENST00000447794 1348 ntBASIC20.66■□□□□ 0.9
VPS8Q8N3P4 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 Z98257.2-202ENST00000641138 1548 ntBASIC20.66■□□□□ 0.9
VPS8Q8N3P4 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 EXTL3-AS1-204ENST00000523789 543 ntTSL 2 BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC20.66■□□□□ 0.9
VPS8Q8N3P4 AC133555.4-201ENST00000569081 152 ntBASIC20.66■□□□□ 0.9
VPS8Q8N3P4 AC016582.2-202ENST00000587765 1094 ntBASIC20.66■□□□□ 0.9
VPS8Q8N3P4 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms