Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 NBEAP3-201ENST00000420638 1493 ntBASIC16.62■□□□□ 0.25
RC3H1Q5TC82 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 AL136379.1-201ENST00000623471 2642 ntBASIC16.62■□□□□ 0.25
RC3H1Q5TC82 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 OAS1-201ENST00000202917 1816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 AC000078.1-201ENST00000420617 682 ntBASIC16.62■□□□□ 0.25
RC3H1Q5TC82 OR7E37P-201ENST00000421076 897 ntBASIC16.62■□□□□ 0.25
RC3H1Q5TC82 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 RN7SL363P-201ENST00000482412 273 ntBASIC16.62■□□□□ 0.25
RC3H1Q5TC82 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 AC103810.4-201ENST00000578601 257 ntBASIC16.62■□□□□ 0.25
RC3H1Q5TC82 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 BX005132.1-201ENST00000641403 1580 ntBASIC16.62■□□□□ 0.25
RC3H1Q5TC82 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC16.62■□□□□ 0.25
RC3H1Q5TC82 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 AC025538.1-201ENST00000510707 1486 ntBASIC16.61■□□□□ 0.25
RC3H1Q5TC82 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 SPTLC1P3-201ENST00000403408 259 ntBASIC16.61■□□□□ 0.25
RC3H1Q5TC82 AL133517.1-201ENST00000413412 748 ntBASIC16.61■□□□□ 0.25
RC3H1Q5TC82 HNRNPA1P68-201ENST00000425806 979 ntBASIC16.61■□□□□ 0.25
RC3H1Q5TC82 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 CHIAP2-202ENST00000449687 669 ntTSL 3 BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 AKR1B1P3-201ENST00000525311 588 ntBASIC16.61■□□□□ 0.25
RC3H1Q5TC82 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 AC009132.1-201ENST00000565194 320 ntBASIC16.61■□□□□ 0.25
RC3H1Q5TC82 PMM2-216ENST00000569958 698 ntTSL 2 BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 CALM3-206ENST00000594523 540 ntTSL 4 BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 U62317.4-201ENST00000609758 448 ntBASIC16.61■□□□□ 0.25
RC3H1Q5TC82 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 ALOX15P2-201ENST00000340858 1897 ntBASIC16.61■□□□□ 0.25
RC3H1Q5TC82 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.61■□□□□ 0.25
RC3H1Q5TC82 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 KIR3DL3-201ENST00000291860 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 FTH1P19-201ENST00000402402 528 ntBASIC16.6■□□□□ 0.25
RC3H1Q5TC82 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 AL049597.1-201ENST00000447415 555 ntBASIC16.6■□□□□ 0.25
RC3H1Q5TC82 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC16.6■□□□□ 0.25
RC3H1Q5TC82 RN7SL105P-201ENST00000475661 299 ntBASIC16.6■□□□□ 0.25
RC3H1Q5TC82 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms