Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.89□□□□□ -0.35
CLK1P49759 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.89□□□□□ -0.35
CLK1P49759 RN7SL530P-201ENST00000485097 298 ntBASIC12.89□□□□□ -0.35
CLK1P49759 GOLGA2P8-201ENST00000505201 779 ntBASIC12.89□□□□□ -0.35
CLK1P49759 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.89□□□□□ -0.35
CLK1P49759 SCARNA20.5-201ENST00000516991 142 ntBASIC12.89□□□□□ -0.35
CLK1P49759 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.89□□□□□ -0.35
CLK1P49759 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.89□□□□□ -0.35
CLK1P49759 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.89□□□□□ -0.35
CLK1P49759 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.89□□□□□ -0.35
CLK1P49759 AC243960.2-201ENST00000600996 747 ntBASIC12.89□□□□□ -0.35
CLK1P49759 AL645939.5-201ENST00000606834 243 ntBASIC12.89□□□□□ -0.35
CLK1P49759 AL451050.2-201ENST00000606967 682 ntBASIC12.89□□□□□ -0.35
CLK1P49759 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
CLK1P49759 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CLK1P49759 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CLK1P49759 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.89□□□□□ -0.35
CLK1P49759 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.89□□□□□ -0.35
CLK1P49759 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.89□□□□□ -0.35
CLK1P49759 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CLK1P49759 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.89□□□□□ -0.35
CLK1P49759 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC12.89□□□□□ -0.35
CLK1P49759 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CLK1P49759 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 TUBBP5-203ENST00000508529 1334 ntBASIC12.88□□□□□ -0.35
CLK1P49759 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.88□□□□□ -0.35
CLK1P49759 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 AC092028.1-202ENST00000641483 3547 ntBASIC12.88□□□□□ -0.35
CLK1P49759 AC092028.1-201ENST00000641781 3540 ntBASIC12.88□□□□□ -0.35
CLK1P49759 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC12.88□□□□□ -0.35
CLK1P49759 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.88□□□□□ -0.35
CLK1P49759 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 AC002350.2-201ENST00000623894 1828 ntBASIC12.88□□□□□ -0.35
CLK1P49759 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.88□□□□□ -0.35
CLK1P49759 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.88□□□□□ -0.35
CLK1P49759 AC022364.1-202ENST00000617468 2409 ntBASIC12.88□□□□□ -0.35
CLK1P49759 TRIM80P-201ENST00000455685 2848 ntBASIC12.88□□□□□ -0.35
CLK1P49759 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CLK1P49759 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.88□□□□□ -0.35
CLK1P49759 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.88□□□□□ -0.35
CLK1P49759 AC016700.1-201ENST00000429424 312 ntBASIC12.88□□□□□ -0.35
CLK1P49759 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.88□□□□□ -0.35
CLK1P49759 BX284668.4-201ENST00000453917 508 ntBASIC12.88□□□□□ -0.35
CLK1P49759 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.88□□□□□ -0.35
CLK1P49759 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.88□□□□□ -0.35
CLK1P49759 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.88□□□□□ -0.35
CLK1P49759 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.88□□□□□ -0.35
CLK1P49759 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.88□□□□□ -0.35
CLK1P49759 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.88□□□□□ -0.35
CLK1P49759 MIR4538-201ENST00000581377 78 ntBASIC12.88□□□□□ -0.35
CLK1P49759 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 MIR6799-201ENST00000620297 69 ntBASIC12.88□□□□□ -0.35
CLK1P49759 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.88□□□□□ -0.35
CLK1P49759 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CLK1P49759 LINC00894-206ENST00000450989 2361 ntTSL 2 BASIC12.88□□□□□ -0.35
CLK1P49759 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.88□□□□□ -0.35
CLK1P49759 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.88□□□□□ -0.35
CLK1P49759 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC12.88□□□□□ -0.35
CLK1P49759 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.88□□□□□ -0.35
CLK1P49759 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.88□□□□□ -0.35
CLK1P49759 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 FAM90A11P-201ENST00000518378 2218 ntBASIC12.88□□□□□ -0.35
CLK1P49759 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CLK1P49759 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLK1P49759 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.88□□□□□ -0.35
CLK1P49759 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CLK1P49759 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CLK1P49759 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
CLK1P49759 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.87□□□□□ -0.35
CLK1P49759 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC12.87□□□□□ -0.35
CLK1P49759 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CLK1P49759 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.87□□□□□ -0.35
CLK1P49759 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CLK1P49759 AL157791.1-201ENST00000553667 1699 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms