Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.16□□□□□ -0.46
ZIC3O60481 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.16□□□□□ -0.46
ZIC3O60481 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
ZIC3O60481 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZIC3O60481 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
ZIC3O60481 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 ZSCAN5DP-201ENST00000600684 1488 ntBASIC12.15□□□□□ -0.46
ZIC3O60481 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.15□□□□□ -0.46
ZIC3O60481 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC12.15□□□□□ -0.46
ZIC3O60481 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
ZIC3O60481 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.15□□□□□ -0.46
ZIC3O60481 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
ZIC3O60481 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
ZIC3O60481 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.15□□□□□ -0.46
ZIC3O60481 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
ZIC3O60481 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
ZIC3O60481 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
ZIC3O60481 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC12.15□□□□□ -0.46
ZIC3O60481 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC12.15□□□□□ -0.46
ZIC3O60481 MTHFD2P7-201ENST00000483867 983 ntBASIC12.15□□□□□ -0.46
ZIC3O60481 AK2-208ENST00000487289 920 ntTSL 2 BASIC12.15□□□□□ -0.46
ZIC3O60481 AL157792.1-201ENST00000488281 530 ntBASIC12.15□□□□□ -0.46
ZIC3O60481 NDUFB2P1-201ENST00000506966 295 ntBASIC12.15□□□□□ -0.46
ZIC3O60481 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
ZIC3O60481 F11R-204ENST00000537746 1245 ntTSL 2 BASIC12.15□□□□□ -0.46
ZIC3O60481 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC12.15□□□□□ -0.46
ZIC3O60481 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC12.15□□□□□ -0.46
ZIC3O60481 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC12.15□□□□□ -0.46
ZIC3O60481 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 AC055811.3-201ENST00000584952 686 ntBASIC12.15□□□□□ -0.46
ZIC3O60481 AP001120.3-201ENST00000585729 489 ntBASIC12.15□□□□□ -0.46
ZIC3O60481 AC010632.2-201ENST00000588369 1224 ntBASIC12.15□□□□□ -0.46
ZIC3O60481 CYP4F36P-201ENST00000589193 186 ntBASIC12.15□□□□□ -0.46
ZIC3O60481 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC12.15□□□□□ -0.46
ZIC3O60481 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
ZIC3O60481 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC12.15□□□□□ -0.46
ZIC3O60481 LINC00643-207ENST00000637212 734 ntBASIC12.15□□□□□ -0.46
ZIC3O60481 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
ZIC3O60481 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC12.15□□□□□ -0.46
ZIC3O60481 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC12.15□□□□□ -0.46
ZIC3O60481 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
ZIC3O60481 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC12.15□□□□□ -0.46
ZIC3O60481 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.15□□□□□ -0.46
ZIC3O60481 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.15□□□□□ -0.46
ZIC3O60481 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZIC3O60481 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC12.15□□□□□ -0.46
ZIC3O60481 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
ZIC3O60481 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
ZIC3O60481 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
ZIC3O60481 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
ZIC3O60481 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
ZIC3O60481 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.15□□□□□ -0.47
ZIC3O60481 MKRN5P-201ENST00000445263 1467 ntBASIC12.14□□□□□ -0.47
ZIC3O60481 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
ZIC3O60481 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
ZIC3O60481 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.14□□□□□ -0.47
ZIC3O60481 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.14□□□□□ -0.47
ZIC3O60481 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ZIC3O60481 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
ZIC3O60481 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.14□□□□□ -0.47
ZIC3O60481 AL022323.5-201ENST00000624101 2059 ntBASIC12.14□□□□□ -0.47
ZIC3O60481 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.14□□□□□ -0.47
ZIC3O60481 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC12.14□□□□□ -0.47
ZIC3O60481 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
ZIC3O60481 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZIC3O60481 SDCBP2P1-201ENST00000416115 614 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms