Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 AC005777.1-201ENST00000588332 187 ntBASIC11.96□□□□□ -0.49
NPIPB4C9JG80 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 AC007881.3-201ENST00000608897 607 ntBASIC11.96□□□□□ -0.49
NPIPB4C9JG80 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 AC242376.2-201ENST00000619355 883 ntBASIC11.96□□□□□ -0.49
NPIPB4C9JG80 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 AL139823.1-201ENST00000641871 1225 ntBASIC11.96□□□□□ -0.49
NPIPB4C9JG80 MICA-210ENST00000616296 2260 ntTSL 5 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NPIPB4C9JG80 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC11.96□□□□□ -0.5
NPIPB4C9JG80 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
NPIPB4C9JG80 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
NPIPB4C9JG80 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC11.96□□□□□ -0.5
NPIPB4C9JG80 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
NPIPB4C9JG80 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC11.96□□□□□ -0.5
NPIPB4C9JG80 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC11.96□□□□□ -0.5
NPIPB4C9JG80 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
NPIPB4C9JG80 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 LINC02228-202ENST00000641261 2489 ntBASIC11.95□□□□□ -0.5
NPIPB4C9JG80 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 HIST2H2BA-201ENST00000412169 381 ntBASIC11.95□□□□□ -0.5
NPIPB4C9JG80 HPGD-203ENST00000422112 805 ntTSL 2 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 EEF1DP6-201ENST00000449232 372 ntBASIC11.95□□□□□ -0.5
NPIPB4C9JG80 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 AC105129.2-201ENST00000559536 390 ntBASIC11.95□□□□□ -0.5
NPIPB4C9JG80 COX5A-205ENST00000568517 582 ntTSL 3 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 AC106872.11-201ENST00000605838 421 ntBASIC11.95□□□□□ -0.5
NPIPB4C9JG80 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 AL021578.1-201ENST00000613646 709 ntBASIC11.95□□□□□ -0.5
NPIPB4C9JG80 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 AC005618.3-201ENST00000624928 458 ntBASIC11.95□□□□□ -0.5
NPIPB4C9JG80 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 AL031432.4-201ENST00000641729 2190 ntBASIC11.95□□□□□ -0.5
NPIPB4C9JG80 PABPC1P2-201ENST00000471997 1805 ntBASIC11.95□□□□□ -0.5
NPIPB4C9JG80 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NPIPB4C9JG80 AC012358.2-201ENST00000430010 1434 ntBASIC11.94□□□□□ -0.5
NPIPB4C9JG80 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 TUBB8P5-201ENST00000445286 1351 ntBASIC11.94□□□□□ -0.5
NPIPB4C9JG80 Z98259.1-201ENST00000564261 1697 ntBASIC11.94□□□□□ -0.5
NPIPB4C9JG80 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
NPIPB4C9JG80 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms