Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CDC42BPAQ5VT25 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42BPAQ5VT25 CDC25C-202ENST00000348983 1951 ntTSL 5 BASIC19.63■□□□□ 0.73
CDC42BPAQ5VT25 AL356583.1-201ENST00000398739 1371 ntBASIC19.63■□□□□ 0.73
CDC42BPAQ5VT25 AC240565.1-201ENST00000624936 1373 ntTSL 5 BASIC19.63■□□□□ 0.73
CDC42BPAQ5VT25 AL353801.2-201ENST00000436877 1444 ntTSL 5 BASIC19.63■□□□□ 0.73
CDC42BPAQ5VT25 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42BPAQ5VT25 AOX3P-202ENST00000469595 1471 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42BPAQ5VT25 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42BPAQ5VT25 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.63■□□□□ 0.73
CDC42BPAQ5VT25 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42BPAQ5VT25 CCDC33-206ENST00000558821 1993 ntTSL 2 BASIC19.63■□□□□ 0.73
CDC42BPAQ5VT25 BANP-203ENST00000393207 2438 ntTSL 2 BASIC19.63■□□□□ 0.73
CDC42BPAQ5VT25 APTX-206ENST00000379825 2023 ntTSL 2 BASIC19.63■□□□□ 0.73
CDC42BPAQ5VT25 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC19.63■□□□□ 0.73
CDC42BPAQ5VT25 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 CDKN2AIPNLP2-201ENST00000274516 352 ntBASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 C16orf78-201ENST00000299191 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 ARPC5-203ENST00000367534 622 ntTSL 3 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 GALM-202ENST00000410063 1023 ntTSL 3 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 AP001360.1-203ENST00000524708 464 ntTSL 3 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 AC079331.1-201ENST00000623200 1200 ntBASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 HIST1H2APS4-202ENST00000635537 681 ntBASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 RGPD4-AS1-202ENST00000457647 1792 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 FAM90A22P-201ENST00000400142 1395 ntBASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 HEBP1-203ENST00000536942 2056 ntTSL 2 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 AC019349.1-201ENST00000411759 476 ntTSL 3 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 AQP7P1-201ENST00000412626 1045 ntBASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 AL133517.1-201ENST00000413412 748 ntBASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 AL355493.1-201ENST00000422707 808 ntBASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 AQP7-207ENST00000447660 998 ntTSL 2 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 AC023157.1-201ENST00000453713 402 ntBASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 RN7SL105P-201ENST00000475661 299 ntBASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 MTND6P4-201ENST00000506002 522 ntBASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 AC253536.5-201ENST00000506097 347 ntBASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 AC015563.2-201ENST00000579580 772 ntTSL 3 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 AL353997.3-201ENST00000586597 589 ntBASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 AC018755.1-201ENST00000601315 1182 ntBASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 AC022146.2-201ENST00000605980 348 ntTSL 3 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 MIR1914-201ENST00000607800 80 ntBASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 GMNN-207ENST00000620958 1039 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDC42BPAQ5VT25 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 AFG3L2P1-201ENST00000521792 1763 ntBASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 JPT2-203ENST00000382711 894 ntTSL 4 BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 IQCF5-201ENST00000446461 512 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 PMM2-216ENST00000569958 698 ntTSL 2 BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC19.61■□□□□ 0.73
CDC42BPAQ5VT25 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms