Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ACTBP14-201ENST00000411655 1089 ntBASIC12.52□□□□□ -0.41
RFC3P40938 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC12.52□□□□□ -0.41
RFC3P40938 HCG27-204ENST00000424675 895 ntTSL 3 BASIC12.52□□□□□ -0.41
RFC3P40938 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC12.52□□□□□ -0.41
RFC3P40938 AL512599.1-201ENST00000430724 685 ntBASIC12.52□□□□□ -0.41
RFC3P40938 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC12.52□□□□□ -0.41
RFC3P40938 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC12.52□□□□□ -0.41
RFC3P40938 HNRNPA1P56-201ENST00000505767 954 ntBASIC12.52□□□□□ -0.41
RFC3P40938 AL359219.1-201ENST00000556311 934 ntBASIC12.52□□□□□ -0.41
RFC3P40938 CES1P2-201ENST00000566467 1242 ntBASIC12.52□□□□□ -0.41
RFC3P40938 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC12.52□□□□□ -0.41
RFC3P40938 AC055811.3-201ENST00000584952 686 ntBASIC12.52□□□□□ -0.41
RFC3P40938 HKR1-225ENST00000592168 566 ntTSL 4 BASIC12.52□□□□□ -0.41
RFC3P40938 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
RFC3P40938 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
RFC3P40938 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.52□□□□□ -0.41
RFC3P40938 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFC3P40938 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFC3P40938 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFC3P40938 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RFC3P40938 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFC3P40938 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.52□□□□□ -0.41
RFC3P40938 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
RFC3P40938 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFC3P40938 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
RFC3P40938 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFC3P40938 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RFC3P40938 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RFC3P40938 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC12.52□□□□□ -0.41
RFC3P40938 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
RFC3P40938 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.52□□□□□ -0.41
RFC3P40938 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.51□□□□□ -0.41
RFC3P40938 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.51□□□□□ -0.41
RFC3P40938 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RFC3P40938 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
RFC3P40938 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
RFC3P40938 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
RFC3P40938 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
RFC3P40938 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.51□□□□□ -0.41
RFC3P40938 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.51□□□□□ -0.41
RFC3P40938 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
RFC3P40938 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RFC3P40938 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
RFC3P40938 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
RFC3P40938 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 AC106827.1-201ENST00000366454 431 ntBASIC12.51□□□□□ -0.41
RFC3P40938 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
RFC3P40938 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC12.51□□□□□ -0.41
RFC3P40938 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC12.51□□□□□ -0.41
RFC3P40938 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
RFC3P40938 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC12.51□□□□□ -0.41
RFC3P40938 PSMD4P1-201ENST00000433951 1109 ntBASIC12.51□□□□□ -0.41
RFC3P40938 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC12.51□□□□□ -0.41
RFC3P40938 AC092903.1-201ENST00000466506 262 ntBASIC12.51□□□□□ -0.41
RFC3P40938 ALG1L3P-201ENST00000503331 765 ntBASIC12.51□□□□□ -0.41
RFC3P40938 NSD1-211ENST00000511258 809 ntTSL 3 BASIC12.51□□□□□ -0.41
RFC3P40938 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC12.51□□□□□ -0.41
RFC3P40938 DLK1-205ENST00000556051 469 ntTSL 2 BASIC12.51□□□□□ -0.41
RFC3P40938 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC12.51□□□□□ -0.41
RFC3P40938 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RFC3P40938 AC006483.2-201ENST00000609813 515 ntBASIC12.51□□□□□ -0.41
RFC3P40938 MIR6746-201ENST00000620971 63 ntBASIC12.51□□□□□ -0.41
RFC3P40938 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.51□□□□□ -0.41
RFC3P40938 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.51□□□□□ -0.41
RFC3P40938 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RFC3P40938 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
RFC3P40938 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
RFC3P40938 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC12.51□□□□□ -0.41
RFC3P40938 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
RFC3P40938 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.51□□□□□ -0.41
RFC3P40938 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RFC3P40938 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.51□□□□□ -0.41
RFC3P40938 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 AL672207.1-201ENST00000328462 1570 ntBASIC12.51□□□□□ -0.41
RFC3P40938 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC12.51□□□□□ -0.41
RFC3P40938 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RFC3P40938 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms