Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC16.87■□□□□ 0.29
COL15A1P39059 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
COL15A1P39059 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC16.87■□□□□ 0.29
COL15A1P39059 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.87■□□□□ 0.29
COL15A1P39059 AL031768.1-201ENST00000606542 701 ntBASIC16.87■□□□□ 0.29
COL15A1P39059 MIR6125-201ENST00000618986 96 ntBASIC16.87■□□□□ 0.29
COL15A1P39059 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC16.87■□□□□ 0.29
COL15A1P39059 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.87■□□□□ 0.29
COL15A1P39059 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC16.87■□□□□ 0.29
COL15A1P39059 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.87■□□□□ 0.29
COL15A1P39059 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.86■□□□□ 0.29
COL15A1P39059 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 RPL4P6-201ENST00000438116 1304 ntBASIC16.86■□□□□ 0.29
COL15A1P39059 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC16.86■□□□□ 0.29
COL15A1P39059 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 AL355102.3-201ENST00000554299 1678 ntBASIC16.86■□□□□ 0.29
COL15A1P39059 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
COL15A1P39059 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC16.86■□□□□ 0.29
COL15A1P39059 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC16.86■□□□□ 0.29
COL15A1P39059 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC16.86■□□□□ 0.29
COL15A1P39059 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC16.86■□□□□ 0.29
COL15A1P39059 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
COL15A1P39059 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 AL031577.1-201ENST00000339867 399 ntBASIC16.86■□□□□ 0.29
COL15A1P39059 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC16.86■□□□□ 0.29
COL15A1P39059 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC16.86■□□□□ 0.29
COL15A1P39059 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 RPSAP61-201ENST00000412542 878 ntBASIC16.86■□□□□ 0.29
COL15A1P39059 AC005822.1-201ENST00000414124 1034 ntBASIC16.86■□□□□ 0.29
COL15A1P39059 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC16.86■□□□□ 0.29
COL15A1P39059 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC16.86■□□□□ 0.29
COL15A1P39059 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC16.86■□□□□ 0.29
COL15A1P39059 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC16.86■□□□□ 0.29
COL15A1P39059 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
COL15A1P39059 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC16.86■□□□□ 0.29
COL15A1P39059 AL078624.1-201ENST00000604004 547 ntBASIC16.86■□□□□ 0.29
COL15A1P39059 AL353622.2-201ENST00000605846 425 ntBASIC16.86■□□□□ 0.29
COL15A1P39059 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.86■□□□□ 0.29
COL15A1P39059 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC16.86■□□□□ 0.29
COL15A1P39059 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
COL15A1P39059 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
COL15A1P39059 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC16.86■□□□□ 0.29
COL15A1P39059 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL15A1P39059 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC16.85■□□□□ 0.29
COL15A1P39059 HNRNPLP1-201ENST00000421896 1501 ntBASIC16.85■□□□□ 0.29
COL15A1P39059 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.85■□□□□ 0.29
COL15A1P39059 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.85■□□□□ 0.29
COL15A1P39059 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL15A1P39059 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL15A1P39059 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
COL15A1P39059 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
COL15A1P39059 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC16.85■□□□□ 0.29
COL15A1P39059 Z97653.2-201ENST00000623057 1418 ntBASIC16.85■□□□□ 0.29
COL15A1P39059 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL15A1P39059 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL15A1P39059 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL15A1P39059 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL15A1P39059 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL15A1P39059 COQ4-202ENST00000372875 928 ntTSL 2 BASIC16.85■□□□□ 0.29
COL15A1P39059 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC16.85■□□□□ 0.29
COL15A1P39059 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC16.85■□□□□ 0.29
COL15A1P39059 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
COL15A1P39059 RNASEH2CP1-201ENST00000454281 502 ntBASIC16.85■□□□□ 0.29
COL15A1P39059 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC16.85■□□□□ 0.29
COL15A1P39059 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC16.85■□□□□ 0.29
COL15A1P39059 HAX1-211ENST00000532105 771 ntTSL 3 BASIC16.85■□□□□ 0.29
COL15A1P39059 AC063924.1-201ENST00000546680 673 ntBASIC16.85■□□□□ 0.29
COL15A1P39059 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC16.85■□□□□ 0.29
COL15A1P39059 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC16.85■□□□□ 0.29
COL15A1P39059 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC16.85■□□□□ 0.29
COL15A1P39059 AC012146.4-201ENST00000575546 271 ntBASIC16.85■□□□□ 0.29
COL15A1P39059 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC16.85■□□□□ 0.29
COL15A1P39059 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL15A1P39059 AL512324.3-201ENST00000619383 882 ntBASIC16.85■□□□□ 0.29
COL15A1P39059 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
COL15A1P39059 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL15A1P39059 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL15A1P39059 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
COL15A1P39059 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL15A1P39059 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL15A1P39059 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL15A1P39059 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms