Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-DOAP06340 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DOAP06340 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DOAP06340 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DOAP06340 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
HLA-DOAP06340 SNX18-202ENST00000343017 3140 ntBASIC15.88■□□□□ 0.13
HLA-DOAP06340 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DOAP06340 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DOAP06340 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HLA-DOAP06340 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DOAP06340 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DOAP06340 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HLA-DOAP06340 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DOAP06340 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HLA-DOAP06340 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DOAP06340 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DOAP06340 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DOAP06340 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-DOAP06340 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DOAP06340 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DOAP06340 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DOAP06340 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DOAP06340 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DOAP06340 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 AC012531.1-201ENST00000562848 2680 ntBASIC15.87■□□□□ 0.13
HLA-DOAP06340 AC005840.4-201ENST00000541242 2494 ntBASIC15.87■□□□□ 0.13
HLA-DOAP06340 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 AC004522.1-201ENST00000419978 654 ntBASIC15.87■□□□□ 0.13
HLA-DOAP06340 AC005014.1-201ENST00000432006 2976 ntBASIC15.87■□□□□ 0.13
HLA-DOAP06340 AC027612.2-202ENST00000445955 1199 ntBASIC15.87■□□□□ 0.13
HLA-DOAP06340 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 RN7SL684P-201ENST00000465665 294 ntBASIC15.87■□□□□ 0.13
HLA-DOAP06340 AK2-208ENST00000487289 920 ntTSL 2 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 SLC25A51P3-201ENST00000521814 889 ntBASIC15.87■□□□□ 0.13
HLA-DOAP06340 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DOAP06340 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC15.87■□□□□ 0.13
HLA-DOAP06340 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DOAP06340 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DOAP06340 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DOAP06340 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DOAP06340 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DOAP06340 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DOAP06340 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
HLA-DOAP06340 Z97653.2-201ENST00000623057 1418 ntBASIC15.86■□□□□ 0.13
HLA-DOAP06340 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DOAP06340 TBC1D3P1-201ENST00000590047 1693 ntBASIC15.86■□□□□ 0.13
HLA-DOAP06340 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
HLA-DOAP06340 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DOAP06340 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DOAP06340 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
HLA-DOAP06340 ZSCAN5DP-201ENST00000600684 1488 ntBASIC15.86■□□□□ 0.13
HLA-DOAP06340 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
HLA-DOAP06340 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DOAP06340 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms