Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AL358852.1-201ENST00000623174 1268 ntBASIC23.41■■□□□ 1.34
YIPF1Q9Y548 AL031602.1-201ENST00000633169 911 ntBASIC23.41■■□□□ 1.34
YIPF1Q9Y548 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
YIPF1Q9Y548 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
YIPF1Q9Y548 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
YIPF1Q9Y548 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.41■■□□□ 1.34
YIPF1Q9Y548 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
YIPF1Q9Y548 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
YIPF1Q9Y548 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.4■■□□□ 1.34
YIPF1Q9Y548 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
YIPF1Q9Y548 AC012414.1-201ENST00000556676 535 ntBASIC23.4■■□□□ 1.34
YIPF1Q9Y548 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
YIPF1Q9Y548 AC079630.1-202ENST00000618127 1840 ntBASIC23.4■■□□□ 1.34
YIPF1Q9Y548 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.4■■□□□ 1.34
YIPF1Q9Y548 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.4■■□□□ 1.34
YIPF1Q9Y548 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
YIPF1Q9Y548 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
YIPF1Q9Y548 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
YIPF1Q9Y548 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.39■■□□□ 1.34
YIPF1Q9Y548 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.39■■□□□ 1.33
YIPF1Q9Y548 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
YIPF1Q9Y548 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.39■■□□□ 1.33
YIPF1Q9Y548 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
YIPF1Q9Y548 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
YIPF1Q9Y548 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
YIPF1Q9Y548 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
YIPF1Q9Y548 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.38■■□□□ 1.33
YIPF1Q9Y548 AC027612.3-201ENST00000413684 1047 ntBASIC23.38■■□□□ 1.33
YIPF1Q9Y548 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
YIPF1Q9Y548 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.37■■□□□ 1.33
YIPF1Q9Y548 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.37■■□□□ 1.33
YIPF1Q9Y548 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
YIPF1Q9Y548 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.37■■□□□ 1.33
YIPF1Q9Y548 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.37■■□□□ 1.33
YIPF1Q9Y548 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
YIPF1Q9Y548 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
YIPF1Q9Y548 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.37■■□□□ 1.33
YIPF1Q9Y548 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.37■■□□□ 1.33
YIPF1Q9Y548 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.37■■□□□ 1.33
YIPF1Q9Y548 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
YIPF1Q9Y548 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.36■■□□□ 1.33
YIPF1Q9Y548 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
YIPF1Q9Y548 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
YIPF1Q9Y548 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
YIPF1Q9Y548 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
YIPF1Q9Y548 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
YIPF1Q9Y548 AC034268.1-201ENST00000441047 882 ntBASIC23.36■■□□□ 1.33
YIPF1Q9Y548 AP005435.1-201ENST00000529293 1178 ntBASIC23.36■■□□□ 1.33
YIPF1Q9Y548 AL354811.1-201ENST00000610286 706 ntBASIC23.36■■□□□ 1.33
YIPF1Q9Y548 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
YIPF1Q9Y548 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
YIPF1Q9Y548 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
YIPF1Q9Y548 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
YIPF1Q9Y548 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.35■■□□□ 1.33
YIPF1Q9Y548 ABCB10P4-201ENST00000566803 2184 ntBASIC23.35■■□□□ 1.33
YIPF1Q9Y548 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
YIPF1Q9Y548 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
YIPF1Q9Y548 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
YIPF1Q9Y548 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.35■■□□□ 1.33
YIPF1Q9Y548 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
YIPF1Q9Y548 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.35■■□□□ 1.33
YIPF1Q9Y548 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.35■■□□□ 1.33
YIPF1Q9Y548 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
YIPF1Q9Y548 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.35■■□□□ 1.33
YIPF1Q9Y548 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.35■■□□□ 1.33
YIPF1Q9Y548 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.35■■□□□ 1.33
YIPF1Q9Y548 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.35■■□□□ 1.33
YIPF1Q9Y548 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.34■■□□□ 1.33
YIPF1Q9Y548 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
YIPF1Q9Y548 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
YIPF1Q9Y548 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
YIPF1Q9Y548 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
YIPF1Q9Y548 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.34■■□□□ 1.33
YIPF1Q9Y548 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
YIPF1Q9Y548 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.34■■□□□ 1.33
YIPF1Q9Y548 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.33■■□□□ 1.33
YIPF1Q9Y548 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
YIPF1Q9Y548 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
YIPF1Q9Y548 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
YIPF1Q9Y548 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.33■■□□□ 1.33
YIPF1Q9Y548 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
YIPF1Q9Y548 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
YIPF1Q9Y548 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
YIPF1Q9Y548 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
YIPF1Q9Y548 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
YIPF1Q9Y548 AC123595.1-201ENST00000440769 1046 ntBASIC23.32■■□□□ 1.32
YIPF1Q9Y548 DUX4L2-201ENST00000561772 1275 ntBASIC23.32■■□□□ 1.32
YIPF1Q9Y548 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.32■■□□□ 1.32
YIPF1Q9Y548 DUX4L6-201ENST00000626483 1275 ntBASIC23.32■■□□□ 1.32
YIPF1Q9Y548 DUX4L1-201ENST00000627662 1275 ntBASIC23.32■■□□□ 1.32
YIPF1Q9Y548 DUX4L8-201ENST00000629013 1275 ntBASIC23.32■■□□□ 1.32
YIPF1Q9Y548 DUX4L3-201ENST00000630187 1275 ntBASIC23.32■■□□□ 1.32
YIPF1Q9Y548 DUX4L7-201ENST00000630678 1275 ntBASIC23.32■■□□□ 1.32
YIPF1Q9Y548 DUX4L5-201ENST00000630834 1275 ntBASIC23.32■■□□□ 1.32
YIPF1Q9Y548 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
YIPF1Q9Y548 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
YIPF1Q9Y548 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
YIPF1Q9Y548 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
YIPF1Q9Y548 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
YIPF1Q9Y548 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms