Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FNDC3AQ9Y2H6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
FNDC3AQ9Y2H6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FNDC3AQ9Y2H6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
FNDC3AQ9Y2H6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
FNDC3AQ9Y2H6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
FNDC3AQ9Y2H6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
FNDC3AQ9Y2H6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.59■■□□□ 1.21
FNDC3AQ9Y2H6 AC099791.2-201ENST00000605725 427 ntBASIC22.59■■□□□ 1.21
FNDC3AQ9Y2H6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FNDC3AQ9Y2H6 RASA4CP-201ENST00000424092 1398 ntBASIC22.59■■□□□ 1.21
FNDC3AQ9Y2H6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FNDC3AQ9Y2H6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
FNDC3AQ9Y2H6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.59■■□□□ 1.21
FNDC3AQ9Y2H6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FNDC3AQ9Y2H6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
FNDC3AQ9Y2H6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.58■■□□□ 1.21
FNDC3AQ9Y2H6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
FNDC3AQ9Y2H6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
FNDC3AQ9Y2H6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
FNDC3AQ9Y2H6 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.58■■□□□ 1.21
FNDC3AQ9Y2H6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.58■■□□□ 1.21
FNDC3AQ9Y2H6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
FNDC3AQ9Y2H6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
FNDC3AQ9Y2H6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
FNDC3AQ9Y2H6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
FNDC3AQ9Y2H6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
FNDC3AQ9Y2H6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.58■■□□□ 1.2
FNDC3AQ9Y2H6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
FNDC3AQ9Y2H6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
FNDC3AQ9Y2H6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
FNDC3AQ9Y2H6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
FNDC3AQ9Y2H6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
FNDC3AQ9Y2H6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.57■■□□□ 1.2
FNDC3AQ9Y2H6 AC027682.1-201ENST00000562846 899 ntBASIC22.57■■□□□ 1.2
FNDC3AQ9Y2H6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
FNDC3AQ9Y2H6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FNDC3AQ9Y2H6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FNDC3AQ9Y2H6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
FNDC3AQ9Y2H6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
FNDC3AQ9Y2H6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FNDC3AQ9Y2H6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
FNDC3AQ9Y2H6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.57■■□□□ 1.2
FNDC3AQ9Y2H6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FNDC3AQ9Y2H6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
FNDC3AQ9Y2H6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FNDC3AQ9Y2H6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
FNDC3AQ9Y2H6 AL162430.1-201ENST00000480705 870 ntBASIC22.56■■□□□ 1.2
FNDC3AQ9Y2H6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.56■■□□□ 1.2
FNDC3AQ9Y2H6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
FNDC3AQ9Y2H6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.56■■□□□ 1.2
FNDC3AQ9Y2H6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
FNDC3AQ9Y2H6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
FNDC3AQ9Y2H6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.55■■□□□ 1.2
FNDC3AQ9Y2H6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
FNDC3AQ9Y2H6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
FNDC3AQ9Y2H6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
FNDC3AQ9Y2H6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
FNDC3AQ9Y2H6 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.55■■□□□ 1.2
FNDC3AQ9Y2H6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
FNDC3AQ9Y2H6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
FNDC3AQ9Y2H6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
FNDC3AQ9Y2H6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.54■■□□□ 1.2
FNDC3AQ9Y2H6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FNDC3AQ9Y2H6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.54■■□□□ 1.2
FNDC3AQ9Y2H6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
FNDC3AQ9Y2H6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
FNDC3AQ9Y2H6 AC008764.7-201ENST00000593779 1081 ntBASIC22.54■■□□□ 1.2
FNDC3AQ9Y2H6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.54■■□□□ 1.2
FNDC3AQ9Y2H6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FNDC3AQ9Y2H6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FNDC3AQ9Y2H6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FNDC3AQ9Y2H6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FNDC3AQ9Y2H6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FNDC3AQ9Y2H6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FNDC3AQ9Y2H6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.53■■□□□ 1.2
FNDC3AQ9Y2H6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
FNDC3AQ9Y2H6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.53■■□□□ 1.2
FNDC3AQ9Y2H6 AC011298.3-201ENST00000615796 283 ntBASIC22.53■■□□□ 1.2
FNDC3AQ9Y2H6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FNDC3AQ9Y2H6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FNDC3AQ9Y2H6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FNDC3AQ9Y2H6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.52■■□□□ 1.2
FNDC3AQ9Y2H6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.52■■□□□ 1.2
FNDC3AQ9Y2H6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
FNDC3AQ9Y2H6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.52■■□□□ 1.2
FNDC3AQ9Y2H6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.52■■□□□ 1.2
FNDC3AQ9Y2H6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.52■■□□□ 1.2
FNDC3AQ9Y2H6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.52■■□□□ 1.2
FNDC3AQ9Y2H6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.52■■□□□ 1.2
FNDC3AQ9Y2H6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
FNDC3AQ9Y2H6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
FNDC3AQ9Y2H6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
FNDC3AQ9Y2H6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
FNDC3AQ9Y2H6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
FNDC3AQ9Y2H6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
FNDC3AQ9Y2H6 AC009102.2-201ENST00000606772 1639 ntBASIC22.51■■□□□ 1.19
FNDC3AQ9Y2H6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
FNDC3AQ9Y2H6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
FNDC3AQ9Y2H6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms