Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
NCKAP1Q9Y2A7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NCKAP1Q9Y2A7 YBX1P1-201ENST00000445822 960 ntBASIC22.31■■□□□ 1.16
NCKAP1Q9Y2A7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NCKAP1Q9Y2A7 AC010525.1-201ENST00000585559 441 ntBASIC22.31■■□□□ 1.16
NCKAP1Q9Y2A7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NCKAP1Q9Y2A7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NCKAP1Q9Y2A7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.31■■□□□ 1.16
NCKAP1Q9Y2A7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NCKAP1Q9Y2A7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NCKAP1Q9Y2A7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NCKAP1Q9Y2A7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NCKAP1Q9Y2A7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NCKAP1Q9Y2A7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NCKAP1Q9Y2A7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.3■■□□□ 1.16
NCKAP1Q9Y2A7 LINC01124-201ENST00000409786 2117 ntBASIC22.3■■□□□ 1.16
NCKAP1Q9Y2A7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.3■■□□□ 1.16
NCKAP1Q9Y2A7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.3■■□□□ 1.16
NCKAP1Q9Y2A7 AL354811.1-201ENST00000610286 706 ntBASIC22.3■■□□□ 1.16
NCKAP1Q9Y2A7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.3■■□□□ 1.16
NCKAP1Q9Y2A7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NCKAP1Q9Y2A7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.29■■□□□ 1.16
NCKAP1Q9Y2A7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NCKAP1Q9Y2A7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.29■■□□□ 1.16
NCKAP1Q9Y2A7 AP005435.1-201ENST00000529293 1178 ntBASIC22.29■■□□□ 1.16
NCKAP1Q9Y2A7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.29■■□□□ 1.16
NCKAP1Q9Y2A7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NCKAP1Q9Y2A7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
NCKAP1Q9Y2A7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NCKAP1Q9Y2A7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NCKAP1Q9Y2A7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
NCKAP1Q9Y2A7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
NCKAP1Q9Y2A7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NCKAP1Q9Y2A7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NCKAP1Q9Y2A7 AC012414.1-201ENST00000556676 535 ntBASIC22.28■■□□□ 1.16
NCKAP1Q9Y2A7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.28■■□□□ 1.16
NCKAP1Q9Y2A7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
NCKAP1Q9Y2A7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
NCKAP1Q9Y2A7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NCKAP1Q9Y2A7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NCKAP1Q9Y2A7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
NCKAP1Q9Y2A7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
NCKAP1Q9Y2A7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
NCKAP1Q9Y2A7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NCKAP1Q9Y2A7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NCKAP1Q9Y2A7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.27■■□□□ 1.16
NCKAP1Q9Y2A7 AC027612.3-201ENST00000413684 1047 ntBASIC22.27■■□□□ 1.16
NCKAP1Q9Y2A7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
NCKAP1Q9Y2A7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NCKAP1Q9Y2A7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
NCKAP1Q9Y2A7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.27■■□□□ 1.16
NCKAP1Q9Y2A7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NCKAP1Q9Y2A7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
NCKAP1Q9Y2A7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
NCKAP1Q9Y2A7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.27■■□□□ 1.16
NCKAP1Q9Y2A7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
NCKAP1Q9Y2A7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
NCKAP1Q9Y2A7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NCKAP1Q9Y2A7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.26■■□□□ 1.15
NCKAP1Q9Y2A7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NCKAP1Q9Y2A7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NCKAP1Q9Y2A7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NCKAP1Q9Y2A7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NCKAP1Q9Y2A7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
NCKAP1Q9Y2A7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
NCKAP1Q9Y2A7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.26■■□□□ 1.15
NCKAP1Q9Y2A7 AC123595.1-201ENST00000440769 1046 ntBASIC22.26■■□□□ 1.15
NCKAP1Q9Y2A7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
NCKAP1Q9Y2A7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NCKAP1Q9Y2A7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
NCKAP1Q9Y2A7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
NCKAP1Q9Y2A7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.25■■□□□ 1.15
NCKAP1Q9Y2A7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.25■■□□□ 1.15
NCKAP1Q9Y2A7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NCKAP1Q9Y2A7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NCKAP1Q9Y2A7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.25■■□□□ 1.15
NCKAP1Q9Y2A7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
NCKAP1Q9Y2A7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NCKAP1Q9Y2A7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.25■■□□□ 1.15
NCKAP1Q9Y2A7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NCKAP1Q9Y2A7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NCKAP1Q9Y2A7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
NCKAP1Q9Y2A7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NCKAP1Q9Y2A7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.24■■□□□ 1.15
NCKAP1Q9Y2A7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NCKAP1Q9Y2A7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.24■■□□□ 1.15
NCKAP1Q9Y2A7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.24■■□□□ 1.15
NCKAP1Q9Y2A7 MIR6084-201ENST00000622012 110 ntBASIC22.24■■□□□ 1.15
NCKAP1Q9Y2A7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
NCKAP1Q9Y2A7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.24■■□□□ 1.15
NCKAP1Q9Y2A7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NCKAP1Q9Y2A7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NCKAP1Q9Y2A7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NCKAP1Q9Y2A7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.23■■□□□ 1.15
NCKAP1Q9Y2A7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NCKAP1Q9Y2A7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
NCKAP1Q9Y2A7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
NCKAP1Q9Y2A7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.23■■□□□ 1.15
NCKAP1Q9Y2A7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.23■■□□□ 1.15
NCKAP1Q9Y2A7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms