Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
MACF1Q9UPN3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MACF1Q9UPN3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC9.4□□□□□ -0.9
MACF1Q9UPN3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC9.4□□□□□ -0.9
MACF1Q9UPN3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC9.4□□□□□ -0.9
MACF1Q9UPN3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC9.4□□□□□ -0.9
MACF1Q9UPN3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MACF1Q9UPN3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MACF1Q9UPN3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
MACF1Q9UPN3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
MACF1Q9UPN3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MACF1Q9UPN3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
MACF1Q9UPN3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC9.4□□□□□ -0.91
MACF1Q9UPN3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC9.4□□□□□ -0.91
MACF1Q9UPN3 CD177P1-201ENST00000606252 935 ntBASIC9.4□□□□□ -0.91
MACF1Q9UPN3 AL139393.2-201ENST00000608721 2025 ntBASIC9.4□□□□□ -0.91
MACF1Q9UPN3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
MACF1Q9UPN3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC9.4□□□□□ -0.91
MACF1Q9UPN3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.91
MACF1Q9UPN3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MACF1Q9UPN3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC9.39□□□□□ -0.91
MACF1Q9UPN3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MACF1Q9UPN3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC9.39□□□□□ -0.91
MACF1Q9UPN3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC9.39□□□□□ -0.91
MACF1Q9UPN3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MACF1Q9UPN3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
MACF1Q9UPN3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
MACF1Q9UPN3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
MACF1Q9UPN3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MACF1Q9UPN3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
MACF1Q9UPN3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MACF1Q9UPN3 UBE2DNL-204ENST00000602536 740 ntBASIC9.39□□□□□ -0.91
MACF1Q9UPN3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC9.39□□□□□ -0.91
MACF1Q9UPN3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MACF1Q9UPN3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC9.39□□□□□ -0.91
MACF1Q9UPN3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MACF1Q9UPN3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
MACF1Q9UPN3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
MACF1Q9UPN3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC9.38□□□□□ -0.91
MACF1Q9UPN3 AC097493.4-201ENST00000641197 219 ntBASIC9.38□□□□□ -0.91
MACF1Q9UPN3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
MACF1Q9UPN3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MACF1Q9UPN3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC9.38□□□□□ -0.91
MACF1Q9UPN3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC9.38□□□□□ -0.91
MACF1Q9UPN3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MACF1Q9UPN3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC9.38□□□□□ -0.91
MACF1Q9UPN3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC9.38□□□□□ -0.91
MACF1Q9UPN3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
MACF1Q9UPN3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC9.38□□□□□ -0.91
MACF1Q9UPN3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MACF1Q9UPN3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MACF1Q9UPN3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
MACF1Q9UPN3 AC055733.4-201ENST00000638462 1354 ntBASIC9.38□□□□□ -0.91
MACF1Q9UPN3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
MACF1Q9UPN3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
MACF1Q9UPN3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC9.38□□□□□ -0.91
MACF1Q9UPN3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
MACF1Q9UPN3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
MACF1Q9UPN3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
MACF1Q9UPN3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC9.37□□□□□ -0.91
MACF1Q9UPN3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
MACF1Q9UPN3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
MACF1Q9UPN3 C1QBPP2-201ENST00000528754 825 ntBASIC9.37□□□□□ -0.91
MACF1Q9UPN3 AC012306.2-201ENST00000609350 630 ntBASIC9.37□□□□□ -0.91
MACF1Q9UPN3 AC092865.7-201ENST00000641832 219 ntBASIC9.37□□□□□ -0.91
MACF1Q9UPN3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
MACF1Q9UPN3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC9.37□□□□□ -0.91
MACF1Q9UPN3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC9.37□□□□□ -0.91
MACF1Q9UPN3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
MACF1Q9UPN3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
MACF1Q9UPN3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
MACF1Q9UPN3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
MACF1Q9UPN3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
MACF1Q9UPN3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC9.37□□□□□ -0.91
MACF1Q9UPN3 KRT126P-201ENST00000549467 1181 ntBASIC9.37□□□□□ -0.91
MACF1Q9UPN3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 AC083880.1-201ENST00000608266 535 ntBASIC9.36□□□□□ -0.91
MACF1Q9UPN3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC9.36□□□□□ -0.91
MACF1Q9UPN3 MKRN4P-201ENST00000444706 1521 ntBASIC9.35□□□□□ -0.91
MACF1Q9UPN3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms