Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MSL2Q9HCI7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
MSL2Q9HCI7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MSL2Q9HCI7 UNC93B3-201ENST00000308076 687 ntBASIC19.03■□□□□ 0.64
MSL2Q9HCI7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.03■□□□□ 0.64
MSL2Q9HCI7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.03■□□□□ 0.64
MSL2Q9HCI7 DUX4L19-201ENST00000557448 1267 ntBASIC19.03■□□□□ 0.64
MSL2Q9HCI7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MSL2Q9HCI7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MSL2Q9HCI7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MSL2Q9HCI7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.03■□□□□ 0.64
MSL2Q9HCI7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
MSL2Q9HCI7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
MSL2Q9HCI7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
MSL2Q9HCI7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.02■□□□□ 0.64
MSL2Q9HCI7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MSL2Q9HCI7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
MSL2Q9HCI7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.02■□□□□ 0.64
MSL2Q9HCI7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSL2Q9HCI7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSL2Q9HCI7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
MSL2Q9HCI7 SERBP1P1-201ENST00000396021 1160 ntBASIC19.02■□□□□ 0.64
MSL2Q9HCI7 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.02■□□□□ 0.64
MSL2Q9HCI7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSL2Q9HCI7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.02■□□□□ 0.64
MSL2Q9HCI7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MSL2Q9HCI7 DUX4L4-201ENST00000566884 1269 ntBASIC19.02■□□□□ 0.64
MSL2Q9HCI7 pRNA.6-201ENST00000610482 90 ntBASIC19.02■□□□□ 0.64
MSL2Q9HCI7 pRNA.5-201ENST00000612139 90 ntBASIC19.02■□□□□ 0.64
MSL2Q9HCI7 pRNA.11-201ENST00000618423 90 ntBASIC19.02■□□□□ 0.64
MSL2Q9HCI7 pRNA.13-201ENST00000619112 90 ntBASIC19.02■□□□□ 0.64
MSL2Q9HCI7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSL2Q9HCI7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.02■□□□□ 0.64
MSL2Q9HCI7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSL2Q9HCI7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MSL2Q9HCI7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MSL2Q9HCI7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
MSL2Q9HCI7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
MSL2Q9HCI7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
MSL2Q9HCI7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSL2Q9HCI7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.01■□□□□ 0.63
MSL2Q9HCI7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.01■□□□□ 0.63
MSL2Q9HCI7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.01■□□□□ 0.63
MSL2Q9HCI7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MSL2Q9HCI7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSL2Q9HCI7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.01■□□□□ 0.63
MSL2Q9HCI7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSL2Q9HCI7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MSL2Q9HCI7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MSL2Q9HCI7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.01■□□□□ 0.63
MSL2Q9HCI7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.01■□□□□ 0.63
MSL2Q9HCI7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
MSL2Q9HCI7 AC110285.6-201ENST00000617652 491 ntBASIC19.01■□□□□ 0.63
MSL2Q9HCI7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.01■□□□□ 0.63
MSL2Q9HCI7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.01■□□□□ 0.63
MSL2Q9HCI7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSL2Q9HCI7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.01■□□□□ 0.63
MSL2Q9HCI7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19■□□□□ 0.63
MSL2Q9HCI7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19■□□□□ 0.63
MSL2Q9HCI7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MSL2Q9HCI7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MSL2Q9HCI7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19■□□□□ 0.63
MSL2Q9HCI7 MIR3181-201ENST00000578512 73 ntBASIC19■□□□□ 0.63
MSL2Q9HCI7 AL136162.1-201ENST00000607711 1078 ntBASIC19■□□□□ 0.63
MSL2Q9HCI7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
MSL2Q9HCI7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19■□□□□ 0.63
MSL2Q9HCI7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MSL2Q9HCI7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19■□□□□ 0.63
MSL2Q9HCI7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MSL2Q9HCI7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19■□□□□ 0.63
MSL2Q9HCI7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSL2Q9HCI7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSL2Q9HCI7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.99■□□□□ 0.63
MSL2Q9HCI7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSL2Q9HCI7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSL2Q9HCI7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MSL2Q9HCI7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSL2Q9HCI7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSL2Q9HCI7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
MSL2Q9HCI7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSL2Q9HCI7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSL2Q9HCI7 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.99■□□□□ 0.63
MSL2Q9HCI7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSL2Q9HCI7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.98■□□□□ 0.63
MSL2Q9HCI7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSL2Q9HCI7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSL2Q9HCI7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
MSL2Q9HCI7 PBX2P1-201ENST00000493219 1291 ntBASIC18.98■□□□□ 0.63
MSL2Q9HCI7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MSL2Q9HCI7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
MSL2Q9HCI7 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.98■□□□□ 0.63
MSL2Q9HCI7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSL2Q9HCI7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSL2Q9HCI7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSL2Q9HCI7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MSL2Q9HCI7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.98■□□□□ 0.63
MSL2Q9HCI7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSL2Q9HCI7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
MSL2Q9HCI7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MSL2Q9HCI7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms