Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCNX3Q9H6A9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCNX3Q9H6A9 AC024257.2-201ENST00000549699 147 ntBASIC20.24■□□□□ 0.83
PCNX3Q9H6A9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.24■□□□□ 0.83
PCNX3Q9H6A9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.24■□□□□ 0.83
PCNX3Q9H6A9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCNX3Q9H6A9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCNX3Q9H6A9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.24■□□□□ 0.83
PCNX3Q9H6A9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.24■□□□□ 0.83
PCNX3Q9H6A9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCNX3Q9H6A9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCNX3Q9H6A9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCNX3Q9H6A9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCNX3Q9H6A9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.23■□□□□ 0.83
PCNX3Q9H6A9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.23■□□□□ 0.83
PCNX3Q9H6A9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PCNX3Q9H6A9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCNX3Q9H6A9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCNX3Q9H6A9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCNX3Q9H6A9 SLC47A1P1-202ENST00000449666 945 ntBASIC20.23■□□□□ 0.83
PCNX3Q9H6A9 AC010525.1-201ENST00000585559 441 ntBASIC20.23■□□□□ 0.83
PCNX3Q9H6A9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
PCNX3Q9H6A9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.22■□□□□ 0.83
PCNX3Q9H6A9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCNX3Q9H6A9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.22■□□□□ 0.83
PCNX3Q9H6A9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCNX3Q9H6A9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
PCNX3Q9H6A9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.22■□□□□ 0.83
PCNX3Q9H6A9 SYT6-210ENST00000641643 1587 ntBASIC20.22■□□□□ 0.83
PCNX3Q9H6A9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.22■□□□□ 0.83
PCNX3Q9H6A9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCNX3Q9H6A9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCNX3Q9H6A9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCNX3Q9H6A9 UNC93B3-201ENST00000308076 687 ntBASIC20.22■□□□□ 0.83
PCNX3Q9H6A9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.22■□□□□ 0.83
PCNX3Q9H6A9 AC106739.1-201ENST00000617035 715 ntBASIC20.22■□□□□ 0.83
PCNX3Q9H6A9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
PCNX3Q9H6A9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.22■□□□□ 0.83
PCNX3Q9H6A9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.22■□□□□ 0.83
PCNX3Q9H6A9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCNX3Q9H6A9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.21■□□□□ 0.83
PCNX3Q9H6A9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.21■□□□□ 0.83
PCNX3Q9H6A9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PCNX3Q9H6A9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCNX3Q9H6A9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCNX3Q9H6A9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.21■□□□□ 0.83
PCNX3Q9H6A9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PCNX3Q9H6A9 AC133561.1-201ENST00000568600 2415 ntBASIC20.21■□□□□ 0.83
PCNX3Q9H6A9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PCNX3Q9H6A9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCNX3Q9H6A9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCNX3Q9H6A9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.83
PCNX3Q9H6A9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCNX3Q9H6A9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.2■□□□□ 0.82
PCNX3Q9H6A9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.2■□□□□ 0.82
PCNX3Q9H6A9 AC004687.1-201ENST00000579003 1625 ntBASIC20.2■□□□□ 0.82
PCNX3Q9H6A9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.2■□□□□ 0.82
PCNX3Q9H6A9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
PCNX3Q9H6A9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PCNX3Q9H6A9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCNX3Q9H6A9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCNX3Q9H6A9 LINC01529-204ENST00000636474 1715 ntBASIC20.19■□□□□ 0.82
PCNX3Q9H6A9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCNX3Q9H6A9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PCNX3Q9H6A9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCNX3Q9H6A9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCNX3Q9H6A9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.19■□□□□ 0.82
PCNX3Q9H6A9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCNX3Q9H6A9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCNX3Q9H6A9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.19■□□□□ 0.82
PCNX3Q9H6A9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCNX3Q9H6A9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCNX3Q9H6A9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCNX3Q9H6A9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCNX3Q9H6A9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCNX3Q9H6A9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.18■□□□□ 0.82
PCNX3Q9H6A9 AL031432.3-201ENST00000607698 485 ntBASIC20.18■□□□□ 0.82
PCNX3Q9H6A9 AC011298.3-201ENST00000615796 283 ntBASIC20.18■□□□□ 0.82
PCNX3Q9H6A9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.18■□□□□ 0.82
PCNX3Q9H6A9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCNX3Q9H6A9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PCNX3Q9H6A9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PCNX3Q9H6A9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.18■□□□□ 0.82
PCNX3Q9H6A9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCNX3Q9H6A9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.18■□□□□ 0.82
PCNX3Q9H6A9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCNX3Q9H6A9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCNX3Q9H6A9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCNX3Q9H6A9 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.17■□□□□ 0.82
PCNX3Q9H6A9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.17■□□□□ 0.82
PCNX3Q9H6A9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.17■□□□□ 0.82
PCNX3Q9H6A9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PCNX3Q9H6A9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCNX3Q9H6A9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PCNX3Q9H6A9 DUX4L4-201ENST00000566884 1269 ntBASIC20.17■□□□□ 0.82
PCNX3Q9H6A9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PCNX3Q9H6A9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PCNX3Q9H6A9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.16■□□□□ 0.82
PCNX3Q9H6A9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCNX3Q9H6A9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms