Protein–RNA interactions for Protein: Q9H5V9

CXorf56, UPF0428 protein CXorf56, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf56Q9H5V9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CXorf56Q9H5V9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
CXorf56Q9H5V9 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.48■■□□□ 1.03
CXorf56Q9H5V9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CXorf56Q9H5V9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CXorf56Q9H5V9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CXorf56Q9H5V9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CXorf56Q9H5V9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.48■■□□□ 1.03
CXorf56Q9H5V9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CXorf56Q9H5V9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.47■■□□□ 1.03
CXorf56Q9H5V9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.47■■□□□ 1.03
CXorf56Q9H5V9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CXorf56Q9H5V9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CXorf56Q9H5V9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CXorf56Q9H5V9 ATP5G2P3-201ENST00000429083 425 ntBASIC21.47■■□□□ 1.03
CXorf56Q9H5V9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CXorf56Q9H5V9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CXorf56Q9H5V9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CXorf56Q9H5V9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CXorf56Q9H5V9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CXorf56Q9H5V9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CXorf56Q9H5V9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CXorf56Q9H5V9 AC004987.1-201ENST00000428627 508 ntBASIC21.46■■□□□ 1.03
CXorf56Q9H5V9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.46■■□□□ 1.03
CXorf56Q9H5V9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CXorf56Q9H5V9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.46■■□□□ 1.03
CXorf56Q9H5V9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CXorf56Q9H5V9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CXorf56Q9H5V9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CXorf56Q9H5V9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CXorf56Q9H5V9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CXorf56Q9H5V9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CXorf56Q9H5V9 AC242852.2-201ENST00000615738 1807 ntBASIC21.45■■□□□ 1.02
CXorf56Q9H5V9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CXorf56Q9H5V9 LINC01521-201ENST00000504184 1943 ntBASIC21.45■■□□□ 1.02
CXorf56Q9H5V9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CXorf56Q9H5V9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CXorf56Q9H5V9 LETM1P2-201ENST00000597330 2178 ntBASIC21.44■■□□□ 1.02
CXorf56Q9H5V9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.44■■□□□ 1.02
CXorf56Q9H5V9 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CXorf56Q9H5V9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CXorf56Q9H5V9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CXorf56Q9H5V9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CXorf56Q9H5V9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.44■■□□□ 1.02
CXorf56Q9H5V9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CXorf56Q9H5V9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CXorf56Q9H5V9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
CXorf56Q9H5V9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.44■■□□□ 1.02
CXorf56Q9H5V9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CXorf56Q9H5V9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
CXorf56Q9H5V9 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CXorf56Q9H5V9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CXorf56Q9H5V9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CXorf56Q9H5V9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CXorf56Q9H5V9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.43■■□□□ 1.02
CXorf56Q9H5V9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CXorf56Q9H5V9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CXorf56Q9H5V9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CXorf56Q9H5V9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.43■■□□□ 1.02
CXorf56Q9H5V9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.43■■□□□ 1.02
CXorf56Q9H5V9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.43■■□□□ 1.02
CXorf56Q9H5V9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CXorf56Q9H5V9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CXorf56Q9H5V9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.43■■□□□ 1.02
CXorf56Q9H5V9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CXorf56Q9H5V9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CXorf56Q9H5V9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CXorf56Q9H5V9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
CXorf56Q9H5V9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CXorf56Q9H5V9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CXorf56Q9H5V9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CXorf56Q9H5V9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
CXorf56Q9H5V9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CXorf56Q9H5V9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CXorf56Q9H5V9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.42■■□□□ 1.02
CXorf56Q9H5V9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CXorf56Q9H5V9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CXorf56Q9H5V9 AL157384.1-201ENST00000445995 2473 ntBASIC21.42■■□□□ 1.02
CXorf56Q9H5V9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CXorf56Q9H5V9 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.42■■□□□ 1.02
CXorf56Q9H5V9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CXorf56Q9H5V9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CXorf56Q9H5V9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CXorf56Q9H5V9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CXorf56Q9H5V9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CXorf56Q9H5V9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CXorf56Q9H5V9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.41■■□□□ 1.02
CXorf56Q9H5V9 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.41■■□□□ 1.02
CXorf56Q9H5V9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.41■■□□□ 1.02
CXorf56Q9H5V9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CXorf56Q9H5V9 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.41■■□□□ 1.02
CXorf56Q9H5V9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.41■■□□□ 1.02
CXorf56Q9H5V9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CXorf56Q9H5V9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CXorf56Q9H5V9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CXorf56Q9H5V9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CXorf56Q9H5V9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.41■■□□□ 1.02
CXorf56Q9H5V9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CXorf56Q9H5V9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CXorf56Q9H5V9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms