Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CYSTM1Q9H1C7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CYSTM1Q9H1C7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CYSTM1Q9H1C7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CYSTM1Q9H1C7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CYSTM1Q9H1C7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CYSTM1Q9H1C7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CYSTM1Q9H1C7 FAM99A-202ENST00000538190 1989 ntBASIC13.1□□□□□ -0.31
CYSTM1Q9H1C7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CYSTM1Q9H1C7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CYSTM1Q9H1C7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
CYSTM1Q9H1C7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
CYSTM1Q9H1C7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CYSTM1Q9H1C7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
CYSTM1Q9H1C7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CYSTM1Q9H1C7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CYSTM1Q9H1C7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CYSTM1Q9H1C7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CYSTM1Q9H1C7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CYSTM1Q9H1C7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CYSTM1Q9H1C7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CYSTM1Q9H1C7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CYSTM1Q9H1C7 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.09□□□□□ -0.31
CYSTM1Q9H1C7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CYSTM1Q9H1C7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.09□□□□□ -0.31
CYSTM1Q9H1C7 ANOS2P-203ENST00000472227 1816 ntBASIC13.09□□□□□ -0.31
CYSTM1Q9H1C7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CYSTM1Q9H1C7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CYSTM1Q9H1C7 AC127502.1-201ENST00000399971 1502 ntBASIC13.08□□□□□ -0.31
CYSTM1Q9H1C7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.08□□□□□ -0.31
CYSTM1Q9H1C7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CYSTM1Q9H1C7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CYSTM1Q9H1C7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.08□□□□□ -0.32
CYSTM1Q9H1C7 AC018445.3-201ENST00000624177 1945 ntBASIC13.08□□□□□ -0.32
CYSTM1Q9H1C7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CYSTM1Q9H1C7 NEFHP1-201ENST00000412845 2629 ntBASIC13.08□□□□□ -0.32
CYSTM1Q9H1C7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CYSTM1Q9H1C7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.08□□□□□ -0.32
CYSTM1Q9H1C7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CYSTM1Q9H1C7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CYSTM1Q9H1C7 AC080038.3-201ENST00000623346 1952 ntBASIC13.08□□□□□ -0.32
CYSTM1Q9H1C7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CYSTM1Q9H1C7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CYSTM1Q9H1C7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CYSTM1Q9H1C7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CYSTM1Q9H1C7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CYSTM1Q9H1C7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CYSTM1Q9H1C7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CYSTM1Q9H1C7 NOC2LP1-202ENST00000452600 2235 ntBASIC13.08□□□□□ -0.32
CYSTM1Q9H1C7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
CYSTM1Q9H1C7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC13.07□□□□□ -0.32
CYSTM1Q9H1C7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CYSTM1Q9H1C7 AC139530.1-201ENST00000575312 1977 ntBASIC13.07□□□□□ -0.32
CYSTM1Q9H1C7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CYSTM1Q9H1C7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CYSTM1Q9H1C7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.07□□□□□ -0.32
CYSTM1Q9H1C7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.07□□□□□ -0.32
CYSTM1Q9H1C7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CYSTM1Q9H1C7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CYSTM1Q9H1C7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CYSTM1Q9H1C7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CYSTM1Q9H1C7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CYSTM1Q9H1C7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 AC120498.9-201ENST00000339021 3867 ntBASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 AC092053.2-201ENST00000640557 1818 ntBASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CYSTM1Q9H1C7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CYSTM1Q9H1C7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CYSTM1Q9H1C7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
CYSTM1Q9H1C7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CYSTM1Q9H1C7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CYSTM1Q9H1C7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CYSTM1Q9H1C7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CYSTM1Q9H1C7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CYSTM1Q9H1C7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CYSTM1Q9H1C7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CYSTM1Q9H1C7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CYSTM1Q9H1C7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
CYSTM1Q9H1C7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC13.05□□□□□ -0.32
CYSTM1Q9H1C7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms