Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 SFR1P2-201ENST00000421841 730 ntBASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 UBE2V1P1-201ENST00000430836 445 ntBASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 MTND4P30-201ENST00000450281 899 ntBASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 GYG1P1-201ENST00000460864 698 ntBASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 AC005412.1-201ENST00000580812 1049 ntBASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 AC008752.3-201ENST00000588113 712 ntBASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 TTR-204ENST00000610404 1040 ntTSL 5 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 AL008638.5-201ENST00000623814 1298 ntBASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 AP003485.1-201ENST00000625093 753 ntBASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 AL590396.2-201ENST00000636511 1041 ntBASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 AC099654.8-201ENST00000637757 681 ntBASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 AC079776.2-201ENST00000641154 1609 ntBASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 NCLP2-201ENST00000416078 1462 ntBASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP4-4Q9BYR3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 ABCB10P3-201ENST00000561950 2166 ntBASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 AL049737.1-201ENST00000413920 1403 ntBASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 MDH1-215ENST00000539945 1443 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 NUSAP1-203ENST00000450592 1301 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 QRSL1P3-201ENST00000552666 1316 ntBASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 C9orf85-201ENST00000334731 1279 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 C4orf22-201ENST00000358105 895 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 PADI4-202ENST00000375453 841 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 APTX-203ENST00000379813 1121 ntTSL 5 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 ZNF738-202ENST00000380870 1142 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 RARRES2P2-201ENST00000394842 485 ntBASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 NUP35P2-201ENST00000416748 943 ntBASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 PACRG-AS3-201ENST00000419182 1131 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 EAF2-202ENST00000451944 960 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 SMIM19-205ENST00000490331 487 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 MTND5P5-201ENST00000503764 376 ntBASIC4.55□□□□□ -1.68
KRTAP4-4Q9BYR3 AC119751.4-201ENST00000507498 357 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms