Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CPPED1Q9BRF8 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.95■□□□□ 0.94
CPPED1Q9BRF8 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.95■□□□□ 0.94
CPPED1Q9BRF8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CPPED1Q9BRF8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPPED1Q9BRF8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.94■□□□□ 0.94
CPPED1Q9BRF8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPPED1Q9BRF8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CPPED1Q9BRF8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPPED1Q9BRF8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
CPPED1Q9BRF8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.94■□□□□ 0.94
CPPED1Q9BRF8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CPPED1Q9BRF8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.94■□□□□ 0.94
CPPED1Q9BRF8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CPPED1Q9BRF8 MIR4508-201ENST00000584178 70 ntBASIC20.94■□□□□ 0.94
CPPED1Q9BRF8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPPED1Q9BRF8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPPED1Q9BRF8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.94■□□□□ 0.94
CPPED1Q9BRF8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
CPPED1Q9BRF8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPPED1Q9BRF8 C11orf96-202ENST00000528572 1834 ntBASIC20.93■□□□□ 0.94
CPPED1Q9BRF8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPPED1Q9BRF8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPPED1Q9BRF8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.93■□□□□ 0.94
CPPED1Q9BRF8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CPPED1Q9BRF8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPPED1Q9BRF8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPPED1Q9BRF8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CPPED1Q9BRF8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CPPED1Q9BRF8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPPED1Q9BRF8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPPED1Q9BRF8 AC007375.3-201ENST00000600936 2314 ntBASIC20.92■□□□□ 0.94
CPPED1Q9BRF8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CPPED1Q9BRF8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CPPED1Q9BRF8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPPED1Q9BRF8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPPED1Q9BRF8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPPED1Q9BRF8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPPED1Q9BRF8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPPED1Q9BRF8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CPPED1Q9BRF8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.92■□□□□ 0.94
CPPED1Q9BRF8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPPED1Q9BRF8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPPED1Q9BRF8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.91■□□□□ 0.94
CPPED1Q9BRF8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPPED1Q9BRF8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPPED1Q9BRF8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CPPED1Q9BRF8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPPED1Q9BRF8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPPED1Q9BRF8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CPPED1Q9BRF8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
CPPED1Q9BRF8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPPED1Q9BRF8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPPED1Q9BRF8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.9■□□□□ 0.94
CPPED1Q9BRF8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.9■□□□□ 0.94
CPPED1Q9BRF8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.9■□□□□ 0.94
CPPED1Q9BRF8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CPPED1Q9BRF8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.89■□□□□ 0.93
CPPED1Q9BRF8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.89■□□□□ 0.93
CPPED1Q9BRF8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.89■□□□□ 0.93
CPPED1Q9BRF8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CPPED1Q9BRF8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPPED1Q9BRF8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CPPED1Q9BRF8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPPED1Q9BRF8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.88■□□□□ 0.93
CPPED1Q9BRF8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CPPED1Q9BRF8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPPED1Q9BRF8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPPED1Q9BRF8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPPED1Q9BRF8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.88■□□□□ 0.93
CPPED1Q9BRF8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPPED1Q9BRF8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPPED1Q9BRF8 AC103834.1-201ENST00000520383 144 ntBASIC20.88■□□□□ 0.93
CPPED1Q9BRF8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.88■□□□□ 0.93
CPPED1Q9BRF8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPPED1Q9BRF8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.88■□□□□ 0.93
CPPED1Q9BRF8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPPED1Q9BRF8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPPED1Q9BRF8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPPED1Q9BRF8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPPED1Q9BRF8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.87■□□□□ 0.93
CPPED1Q9BRF8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.87■□□□□ 0.93
CPPED1Q9BRF8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.87■□□□□ 0.93
CPPED1Q9BRF8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPPED1Q9BRF8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPPED1Q9BRF8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CPPED1Q9BRF8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPPED1Q9BRF8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.86■□□□□ 0.93
CPPED1Q9BRF8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPPED1Q9BRF8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPPED1Q9BRF8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CPPED1Q9BRF8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPPED1Q9BRF8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPPED1Q9BRF8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPPED1Q9BRF8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.86■□□□□ 0.93
CPPED1Q9BRF8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.86■□□□□ 0.93
CPPED1Q9BRF8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CPPED1Q9BRF8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.86■□□□□ 0.93
CPPED1Q9BRF8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CPPED1Q9BRF8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms