Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 YGL199CYGL199C 471 nt3.37□□□□□ -1.87
ATG40Q99325 IRC9YJL142C 393 nt3.37□□□□□ -1.87
ATG40Q99325 YMR114CYMR114C 1107 nt3.37□□□□□ -1.87
ATG40Q99325 GDT1YBR187W 843 nt3.37□□□□□ -1.87
ATG40Q99325 SLX1YBR228W 915 nt3.37□□□□□ -1.87
ATG40Q99325 YBR139WYBR139W 1527 nt3.37□□□□□ -1.87
ATG40Q99325 AIM7YDR063W 450 nt3.36□□□□□ -1.87
ATG40Q99325 YDR230WYDR230W 348 nt3.36□□□□□ -1.87
ATG40Q99325 PIC2YER053C 903 nt3.36□□□□□ -1.87
ATG40Q99325 PER33YLR064W 822 nt3.36□□□□□ -1.87
ATG40Q99325 MVD1YNR043W 1191 nt3.36□□□□□ -1.87
ATG40Q99325 NCE102YPR149W 522 nt3.36□□□□□ -1.87
ATG40Q99325 RAD26YJR035W 3258 nt3.36□□□□□ -1.87
ATG40Q99325 YNR065CYNR065C 3351 nt3.35□□□□□ -1.87
ATG40Q99325 TCO89YPL180W 2400 nt3.35□□□□□ -1.87
ATG40Q99325 MCM2YBL023C 2607 nt3.35□□□□□ -1.87
ATG40Q99325 HSP30YCR021C 999 nt3.35□□□□□ -1.87
ATG40Q99325 FMP48YGR052W 1110 nt3.35□□□□□ -1.87
ATG40Q99325 YIL014C-AYIL014C-A 315 nt3.35□□□□□ -1.87
ATG40Q99325 YOL035CYOL035C 303 nt3.35□□□□□ -1.87
ATG40Q99325 LAP2YNL045W 2016 nt3.35□□□□□ -1.87
ATG40Q99325 RPN5YDL147W 1338 nt3.35□□□□□ -1.87
ATG40Q99325 IXR1YKL032C 1794 nt3.35□□□□□ -1.87
ATG40Q99325 MAL13YGR288W 1422 nt3.35□□□□□ -1.87
ATG40Q99325 MMR1YLR190W 1476 nt3.35□□□□□ -1.87
ATG40Q99325 GSH2YOL049W 1476 nt3.35□□□□□ -1.87
ATG40Q99325 NCR1YPL006W 3513 nt3.34□□□□□ -1.87
ATG40Q99325 YBR225WYBR225W 2703 nt3.34□□□□□ -1.87
ATG40Q99325 RRT7YLL030C 342 nt3.34□□□□□ -1.87
ATG40Q99325 YLR157W-DYLR157W-D 213 nt3.34□□□□□ -1.87
ATG40Q99325 TAF11YML015C 1041 nt3.34□□□□□ -1.87
ATG40Q99325 YML116W-AYML116W-A 303 nt3.34□□□□□ -1.87
ATG40Q99325 EOS1YNL080C 1101 nt3.34□□□□□ -1.87
ATG40Q99325 IDS2YJL146W 1410 nt3.34□□□□□ -1.88
ATG40Q99325 SPT23YKL020C 3249 nt3.34□□□□□ -1.88
ATG40Q99325 TDA11YHR159W 1515 nt3.34□□□□□ -1.88
ATG40Q99325 CHD1YER164W 4407 nt3.33□□□□□ -1.88
ATG40Q99325 YDL228CYDL228C 642 nt3.33□□□□□ -1.88
ATG40Q99325 RPS13YDR064W 456 nt3.33□□□□□ -1.88
ATG40Q99325 SNM1YDR478W 597 nt3.33□□□□□ -1.88
ATG40Q99325 YER076CYER076C 909 nt3.33□□□□□ -1.88
ATG40Q99325 ASC1YMR116C 960 nt3.33□□□□□ -1.88
ATG40Q99325 ZRC1YMR243C 1329 nt3.33□□□□□ -1.88
ATG40Q99325 RAD57YDR004W 1383 nt3.33□□□□□ -1.88
ATG40Q99325 ECM32YER176W 3366 nt3.33□□□□□ -1.88
ATG40Q99325 IBA57YJR122W 1494 nt3.33□□□□□ -1.88
ATG40Q99325 NTH1YDR001C 2256 nt3.32□□□□□ -1.88
ATG40Q99325 MNL1YHR204W 2391 nt3.32□□□□□ -1.88
ATG40Q99325 TMA17YDL110C 453 nt3.32□□□□□ -1.88
ATG40Q99325 SPR28YDR218C 1272 nt3.32□□□□□ -1.88
ATG40Q99325 YDR445CYDR445C 408 nt3.32□□□□□ -1.88
ATG40Q99325 YGR011WYGR011W 327 nt3.32□□□□□ -1.88
ATG40Q99325 SRB5YGR104C 924 nt3.32□□□□□ -1.88
ATG40Q99325 WSS1YHR134W 810 nt3.32□□□□□ -1.88
ATG40Q99325 NOP13YNL175C 1212 nt3.32□□□□□ -1.88
ATG40Q99325 YNL181WYNL181W 1224 nt3.32□□□□□ -1.88
ATG40Q99325 YNR061CYNR061C 660 nt3.32□□□□□ -1.88
ATG40Q99325 OMS1YDR316W 1416 nt3.32□□□□□ -1.88
ATG40Q99325 NUP133YKR082W 3474 nt3.31□□□□□ -1.88
ATG40Q99325 CWH43YCR017C 2862 nt3.31□□□□□ -1.88
ATG40Q99325 AHA1YDR214W 1053 nt3.31□□□□□ -1.88
ATG40Q99325 RTA1YGR213C 954 nt3.31□□□□□ -1.88
ATG40Q99325 YGR291CYGR291C 222 nt3.31□□□□□ -1.88
ATG40Q99325 YHR032C-AYHR032C-A 120 nt3.31□□□□□ -1.88
ATG40Q99325 REC104YHR157W 549 nt3.31□□□□□ -1.88
ATG40Q99325 HIS5YIL116W 1158 nt3.31□□□□□ -1.88
ATG40Q99325 SOP4YJL192C 705 nt3.31□□□□□ -1.88
ATG40Q99325 CUS2YNL286W 858 nt3.31□□□□□ -1.88
ATG40Q99325 MRM1YOR201C 1239 nt3.31□□□□□ -1.88
ATG40Q99325 YBR298C-AYBR298C-A 222 nt3.31□□□□□ -1.88
ATG40Q99325 FYV5YCL058C 459 nt3.31□□□□□ -1.88
ATG40Q99325 IOC2YLR095C 2439 nt3.31□□□□□ -1.88
ATG40Q99325 RPB2YOR151C 3675 nt3.31□□□□□ -1.88
ATG40Q99325 YML020WYML020W 1995 nt3.31□□□□□ -1.88
ATG40Q99325 TCB3YML072C 4638 nt3.3□□□□□ -1.88
ATG40Q99325 KRE29YER038C 1395 nt3.3□□□□□ -1.88
ATG40Q99325 UBC1YDR177W 648 nt3.3□□□□□ -1.88
ATG40Q99325 YDR274CYDR274C 372 nt3.3□□□□□ -1.88
ATG40Q99325 YER034WYER034W 558 nt3.3□□□□□ -1.88
ATG40Q99325 YJR112W-AYJR112W-A 330 nt3.3□□□□□ -1.88
ATG40Q99325 ORM2YLR350W 651 nt3.3□□□□□ -1.88
ATG40Q99325 YBL010CYBL010C 843 nt3.3□□□□□ -1.88
ATG40Q99325 YBL036CYBL036C 774 nt3.3□□□□□ -1.88
ATG40Q99325 NRK1YNL129W 723 nt3.3□□□□□ -1.88
ATG40Q99325 REX4YOL080C 870 nt3.3□□□□□ -1.88
ATG40Q99325 OM14YBR230C 405 nt3.3□□□□□ -1.88
ATG40Q99325 YDL109CYDL109C 1944 nt3.3□□□□□ -1.88
ATG40Q99325 VPS45YGL095C 1734 nt3.3□□□□□ -1.88
ATG40Q99325 MLH2YLR035C 2088 nt3.29□□□□□ -1.88
ATG40Q99325 MAG1YER142C 891 nt3.29□□□□□ -1.88
ATG40Q99325 COS4YFL062W 1140 nt3.29□□□□□ -1.88
ATG40Q99325 tL(UAG)JtL(UAG)J 82 nt3.29□□□□□ -1.88
ATG40Q99325 tL(UAG)L1tL(UAG)L1 82 nt3.29□□□□□ -1.88
ATG40Q99325 tL(UAG)L2tL(UAG)L2 82 nt3.29□□□□□ -1.88
ATG40Q99325 HIS6YIL020C 786 nt3.29□□□□□ -1.88
ATG40Q99325 RFU1YLR073C 603 nt3.29□□□□□ -1.88
ATG40Q99325 COS3YML132W 1140 nt3.29□□□□□ -1.88
ATG40Q99325 YPR059CYPR059C 387 nt3.29□□□□□ -1.88
ATG40Q99325 COS2YBR302C 1140 nt3.29□□□□□ -1.88
ATG40Q99325 STU1YBL034C 4542 nt3.29□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 17.7 ms