Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTHRC1Q96CG8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CTHRC1Q96CG8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTHRC1Q96CG8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CTHRC1Q96CG8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTHRC1Q96CG8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTHRC1Q96CG8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTHRC1Q96CG8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.7■□□□□ 0.9
CTHRC1Q96CG8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CTHRC1Q96CG8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTHRC1Q96CG8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CTHRC1Q96CG8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CTHRC1Q96CG8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CTHRC1Q96CG8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
CTHRC1Q96CG8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.69■□□□□ 0.9
CTHRC1Q96CG8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.69■□□□□ 0.9
CTHRC1Q96CG8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.69■□□□□ 0.9
CTHRC1Q96CG8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CTHRC1Q96CG8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
CTHRC1Q96CG8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.69■□□□□ 0.9
CTHRC1Q96CG8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTHRC1Q96CG8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CTHRC1Q96CG8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTHRC1Q96CG8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.69■□□□□ 0.9
CTHRC1Q96CG8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTHRC1Q96CG8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTHRC1Q96CG8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.68■□□□□ 0.9
CTHRC1Q96CG8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTHRC1Q96CG8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.68■□□□□ 0.9
CTHRC1Q96CG8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CTHRC1Q96CG8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTHRC1Q96CG8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.68■□□□□ 0.9
CTHRC1Q96CG8 AL136116.3-201ENST00000402907 1138 ntBASIC20.68■□□□□ 0.9
CTHRC1Q96CG8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTHRC1Q96CG8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.68■□□□□ 0.9
CTHRC1Q96CG8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.68■□□□□ 0.9
CTHRC1Q96CG8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.68■□□□□ 0.9
CTHRC1Q96CG8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTHRC1Q96CG8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTHRC1Q96CG8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTHRC1Q96CG8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CTHRC1Q96CG8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTHRC1Q96CG8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTHRC1Q96CG8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTHRC1Q96CG8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.67■□□□□ 0.9
CTHRC1Q96CG8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTHRC1Q96CG8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
CTHRC1Q96CG8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTHRC1Q96CG8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTHRC1Q96CG8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.67■□□□□ 0.9
CTHRC1Q96CG8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CTHRC1Q96CG8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CTHRC1Q96CG8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.67■□□□□ 0.9
CTHRC1Q96CG8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTHRC1Q96CG8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.67■□□□□ 0.9
CTHRC1Q96CG8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTHRC1Q96CG8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTHRC1Q96CG8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.66■□□□□ 0.9
CTHRC1Q96CG8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTHRC1Q96CG8 DUX4L19-201ENST00000557448 1267 ntBASIC20.66■□□□□ 0.9
CTHRC1Q96CG8 MIR3181-201ENST00000578512 73 ntBASIC20.66■□□□□ 0.9
CTHRC1Q96CG8 pRNA.6-201ENST00000610482 90 ntBASIC20.66■□□□□ 0.9
CTHRC1Q96CG8 pRNA.5-201ENST00000612139 90 ntBASIC20.66■□□□□ 0.9
CTHRC1Q96CG8 pRNA.11-201ENST00000618423 90 ntBASIC20.66■□□□□ 0.9
CTHRC1Q96CG8 pRNA.13-201ENST00000619112 90 ntBASIC20.66■□□□□ 0.9
CTHRC1Q96CG8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CTHRC1Q96CG8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTHRC1Q96CG8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTHRC1Q96CG8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTHRC1Q96CG8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTHRC1Q96CG8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CTHRC1Q96CG8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTHRC1Q96CG8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTHRC1Q96CG8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CTHRC1Q96CG8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CTHRC1Q96CG8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTHRC1Q96CG8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.65■□□□□ 0.9
CTHRC1Q96CG8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTHRC1Q96CG8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTHRC1Q96CG8 AC012676.1-201ENST00000574705 1949 ntBASIC20.65■□□□□ 0.9
CTHRC1Q96CG8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CTHRC1Q96CG8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTHRC1Q96CG8 AC008406.3-201ENST00000620001 1374 ntBASIC20.64■□□□□ 0.89
CTHRC1Q96CG8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTHRC1Q96CG8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.64■□□□□ 0.89
CTHRC1Q96CG8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTHRC1Q96CG8 AL138724.1-201ENST00000606771 1088 ntBASIC20.64■□□□□ 0.89
CTHRC1Q96CG8 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.64■□□□□ 0.89
CTHRC1Q96CG8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.64■□□□□ 0.89
CTHRC1Q96CG8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTHRC1Q96CG8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CTHRC1Q96CG8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.64■□□□□ 0.89
CTHRC1Q96CG8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.64■□□□□ 0.89
CTHRC1Q96CG8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTHRC1Q96CG8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTHRC1Q96CG8 AC133637.1-201ENST00000624115 1537 ntBASIC20.63■□□□□ 0.89
CTHRC1Q96CG8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.63■□□□□ 0.89
CTHRC1Q96CG8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CTHRC1Q96CG8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTHRC1Q96CG8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms