Protein–RNA interactions for Protein: Q92743

HTRA1, Serine protease HTRA1, humanhuman

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1Q92743 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA1Q92743 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA1Q92743 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA1Q92743 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA1Q92743 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA1Q92743 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA1Q92743 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA1Q92743 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA1Q92743 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
HTRA1Q92743 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
HTRA1Q92743 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.33■□□□□ 0.84
HTRA1Q92743 AF131216.4-201ENST00000638924 1588 ntBASIC20.33■□□□□ 0.84
HTRA1Q92743 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.32■□□□□ 0.84
HTRA1Q92743 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA1Q92743 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
HTRA1Q92743 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HTRA1Q92743 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA1Q92743 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA1Q92743 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.32■□□□□ 0.84
HTRA1Q92743 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.32■□□□□ 0.84
HTRA1Q92743 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.32■□□□□ 0.84
HTRA1Q92743 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HTRA1Q92743 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA1Q92743 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA1Q92743 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA1Q92743 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA1Q92743 GUSBP5-202ENST00000510805 1989 ntBASIC20.32■□□□□ 0.84
HTRA1Q92743 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
HTRA1Q92743 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA1Q92743 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA1Q92743 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA1Q92743 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HTRA1Q92743 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA1Q92743 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA1Q92743 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HTRA1Q92743 AL356441.2-201ENST00000443009 864 ntBASIC20.31■□□□□ 0.84
HTRA1Q92743 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.31■□□□□ 0.84
HTRA1Q92743 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
HTRA1Q92743 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA1Q92743 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA1Q92743 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA1Q92743 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA1Q92743 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA1Q92743 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA1Q92743 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA1Q92743 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA1Q92743 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.3■□□□□ 0.84
HTRA1Q92743 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA1Q92743 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA1Q92743 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA1Q92743 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA1Q92743 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.3■□□□□ 0.84
HTRA1Q92743 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HTRA1Q92743 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA1Q92743 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.3■□□□□ 0.84
HTRA1Q92743 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
HTRA1Q92743 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HTRA1Q92743 AC131274.2-201ENST00000580697 1507 ntBASIC20.29■□□□□ 0.84
HTRA1Q92743 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA1Q92743 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HTRA1Q92743 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA1Q92743 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HTRA1Q92743 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HTRA1Q92743 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA1Q92743 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.29■□□□□ 0.84
HTRA1Q92743 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA1Q92743 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA1Q92743 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA1Q92743 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA1Q92743 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.28■□□□□ 0.84
HTRA1Q92743 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA1Q92743 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
HTRA1Q92743 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HTRA1Q92743 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.28■□□□□ 0.84
HTRA1Q92743 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HTRA1Q92743 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA1Q92743 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.28■□□□□ 0.84
HTRA1Q92743 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA1Q92743 DUSP8P3-201ENST00000399571 1760 ntBASIC20.28■□□□□ 0.84
HTRA1Q92743 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.28■□□□□ 0.84
HTRA1Q92743 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.27■□□□□ 0.84
HTRA1Q92743 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA1Q92743 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA1Q92743 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA1Q92743 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HTRA1Q92743 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA1Q92743 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA1Q92743 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HTRA1Q92743 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
HTRA1Q92743 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.27■□□□□ 0.84
HTRA1Q92743 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA1Q92743 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA1Q92743 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA1Q92743 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
HTRA1Q92743 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA1Q92743 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HTRA1Q92743 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
HTRA1Q92743 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HTRA1Q92743 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
HTRA1Q92743 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms