Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
USP6NLQ92738 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.41■■□□□ 1.66
USP6NLQ92738 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
USP6NLQ92738 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
USP6NLQ92738 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.41■■□□□ 1.66
USP6NLQ92738 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
USP6NLQ92738 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC25.41■■□□□ 1.66
USP6NLQ92738 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC25.41■■□□□ 1.66
USP6NLQ92738 TK2-208ENST00000545043 1120 ntTSL 2 BASIC25.41■■□□□ 1.66
USP6NLQ92738 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
USP6NLQ92738 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.41■■□□□ 1.66
USP6NLQ92738 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
USP6NLQ92738 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
USP6NLQ92738 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
USP6NLQ92738 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
USP6NLQ92738 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC25.4■■□□□ 1.66
USP6NLQ92738 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.4■■□□□ 1.66
USP6NLQ92738 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
USP6NLQ92738 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
USP6NLQ92738 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.4■■□□□ 1.66
USP6NLQ92738 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
USP6NLQ92738 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.39■■□□□ 1.66
USP6NLQ92738 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.39■■□□□ 1.66
USP6NLQ92738 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
USP6NLQ92738 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
USP6NLQ92738 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
USP6NLQ92738 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.39■■□□□ 1.66
USP6NLQ92738 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.66
USP6NLQ92738 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.39■■□□□ 1.65
USP6NLQ92738 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.39■■□□□ 1.65
USP6NLQ92738 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
USP6NLQ92738 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
USP6NLQ92738 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC25.38■■□□□ 1.65
USP6NLQ92738 CDCA4P2-201ENST00000441182 718 ntBASIC25.38■■□□□ 1.65
USP6NLQ92738 TPRG1LP1-201ENST00000598702 760 ntBASIC25.38■■□□□ 1.65
USP6NLQ92738 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
USP6NLQ92738 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
USP6NLQ92738 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
USP6NLQ92738 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC25.37■■□□□ 1.65
USP6NLQ92738 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
USP6NLQ92738 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.37■■□□□ 1.65
USP6NLQ92738 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
USP6NLQ92738 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
USP6NLQ92738 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
USP6NLQ92738 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC25.36■■□□□ 1.65
USP6NLQ92738 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC25.36■■□□□ 1.65
USP6NLQ92738 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.36■■□□□ 1.65
USP6NLQ92738 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC25.36■■□□□ 1.65
USP6NLQ92738 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
USP6NLQ92738 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
USP6NLQ92738 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
USP6NLQ92738 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
USP6NLQ92738 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
USP6NLQ92738 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.35■■□□□ 1.65
USP6NLQ92738 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
USP6NLQ92738 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
USP6NLQ92738 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC25.35■■□□□ 1.65
USP6NLQ92738 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.35■■□□□ 1.65
USP6NLQ92738 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.35■■□□□ 1.65
USP6NLQ92738 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC25.35■■□□□ 1.65
USP6NLQ92738 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.35■■□□□ 1.65
USP6NLQ92738 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC25.35■■□□□ 1.65
USP6NLQ92738 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
USP6NLQ92738 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
USP6NLQ92738 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
USP6NLQ92738 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
USP6NLQ92738 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
USP6NLQ92738 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
USP6NLQ92738 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
USP6NLQ92738 AC073111.5-205ENST00000641717 521 ntBASIC25.34■■□□□ 1.65
USP6NLQ92738 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
USP6NLQ92738 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.34■■□□□ 1.65
USP6NLQ92738 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
USP6NLQ92738 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
USP6NLQ92738 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
USP6NLQ92738 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.33■■□□□ 1.65
USP6NLQ92738 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.33■■□□□ 1.65
USP6NLQ92738 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
USP6NLQ92738 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.33■■□□□ 1.65
USP6NLQ92738 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
USP6NLQ92738 GALNS-213ENST00000569433 723 ntTSL 3 BASIC25.33■■□□□ 1.65
USP6NLQ92738 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC25.33■■□□□ 1.65
USP6NLQ92738 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
USP6NLQ92738 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
USP6NLQ92738 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
USP6NLQ92738 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
USP6NLQ92738 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
USP6NLQ92738 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.64
USP6NLQ92738 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
USP6NLQ92738 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
USP6NLQ92738 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
USP6NLQ92738 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
USP6NLQ92738 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
USP6NLQ92738 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
USP6NLQ92738 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC25.32■■□□□ 1.64
USP6NLQ92738 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.32■■□□□ 1.64
USP6NLQ92738 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC25.32■■□□□ 1.64
USP6NLQ92738 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.32■■□□□ 1.64
USP6NLQ92738 AC144652.1-201ENST00000609974 1624 ntBASIC25.32■■□□□ 1.64
USP6NLQ92738 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms