Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD3L1Q8WWY6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD3L1Q8WWY6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.45■□□□□ 0.38
MBD3L1Q8WWY6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD3L1Q8WWY6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.45■□□□□ 0.38
MBD3L1Q8WWY6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD3L1Q8WWY6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.45■□□□□ 0.38
MBD3L1Q8WWY6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.45■□□□□ 0.38
MBD3L1Q8WWY6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD3L1Q8WWY6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD3L1Q8WWY6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.45■□□□□ 0.38
MBD3L1Q8WWY6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 AC087742.1-201ENST00000575880 1738 ntBASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L1Q8WWY6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD3L1Q8WWY6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MBD3L1Q8WWY6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MBD3L1Q8WWY6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MBD3L1Q8WWY6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.42■□□□□ 0.38
MBD3L1Q8WWY6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.42■□□□□ 0.38
MBD3L1Q8WWY6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.42■□□□□ 0.38
MBD3L1Q8WWY6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.42■□□□□ 0.38
MBD3L1Q8WWY6 AC093536.1-201ENST00000569153 554 ntBASIC17.42■□□□□ 0.38
MBD3L1Q8WWY6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD3L1Q8WWY6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.42■□□□□ 0.38
MBD3L1Q8WWY6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MBD3L1Q8WWY6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L1Q8WWY6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L1Q8WWY6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L1Q8WWY6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L1Q8WWY6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.41■□□□□ 0.38
MBD3L1Q8WWY6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L1Q8WWY6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L1Q8WWY6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MBD3L1Q8WWY6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L1Q8WWY6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L1Q8WWY6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.41■□□□□ 0.38
MBD3L1Q8WWY6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.41■□□□□ 0.38
MBD3L1Q8WWY6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.41■□□□□ 0.38
MBD3L1Q8WWY6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
MBD3L1Q8WWY6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L1Q8WWY6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L1Q8WWY6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L1Q8WWY6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD3L1Q8WWY6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD3L1Q8WWY6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L1Q8WWY6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
MBD3L1Q8WWY6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L1Q8WWY6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.4■□□□□ 0.38
MBD3L1Q8WWY6 AC060814.1-201ENST00000554326 538 ntBASIC17.4■□□□□ 0.38
MBD3L1Q8WWY6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.4■□□□□ 0.38
MBD3L1Q8WWY6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L1Q8WWY6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
MBD3L1Q8WWY6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L1Q8WWY6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L1Q8WWY6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
MBD3L1Q8WWY6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
MBD3L1Q8WWY6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms