Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 AC079630.1-202ENST00000618127 1840 ntBASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 AL162393.1-201ENST00000437852 946 ntBASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11BQ8TCY0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 AC080038.3-201ENST00000623346 1952 ntBASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11BQ8TCY0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 AC092667.1-201ENST00000434301 2586 ntBASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11BQ8TCY0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 KRT18P10-201ENST00000388836 1287 ntBASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 AL157400.5-201ENST00000507624 621 ntBASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 DUX4L11-201ENST00000611504 1267 ntBASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 DUX4L12-201ENST00000614593 1267 ntBASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 DUX4L14-201ENST00000621227 1267 ntBASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 FAM99A-202ENST00000538190 1989 ntBASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11BQ8TCY0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM11BQ8TCY0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC14.39□□□□□ -0.11
SMIM11BQ8TCY0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.39□□□□□ -0.11
SMIM11BQ8TCY0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM11BQ8TCY0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM11BQ8TCY0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM11BQ8TCY0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
SMIM11BQ8TCY0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM11BQ8TCY0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms