Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPEB3Q8NE35 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPEB3Q8NE35 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CPEB3Q8NE35 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPEB3Q8NE35 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPEB3Q8NE35 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CPEB3Q8NE35 SRD5A1P1-201ENST00000442297 786 ntBASIC19.41■□□□□ 0.7
CPEB3Q8NE35 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.41■□□□□ 0.7
CPEB3Q8NE35 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPEB3Q8NE35 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPEB3Q8NE35 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CPEB3Q8NE35 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPEB3Q8NE35 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPEB3Q8NE35 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPEB3Q8NE35 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CPEB3Q8NE35 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
CPEB3Q8NE35 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPEB3Q8NE35 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.4■□□□□ 0.7
CPEB3Q8NE35 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPEB3Q8NE35 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CPEB3Q8NE35 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPEB3Q8NE35 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPEB3Q8NE35 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.4■□□□□ 0.7
CPEB3Q8NE35 AC099791.2-201ENST00000605725 427 ntBASIC19.4■□□□□ 0.7
CPEB3Q8NE35 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPEB3Q8NE35 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CPEB3Q8NE35 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPEB3Q8NE35 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CPEB3Q8NE35 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.39■□□□□ 0.69
CPEB3Q8NE35 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPEB3Q8NE35 AC241377.3-202ENST00000626088 1088 ntBASIC19.39■□□□□ 0.69
CPEB3Q8NE35 AC241585.3-202ENST00000628937 1088 ntBASIC19.39■□□□□ 0.69
CPEB3Q8NE35 AC245100.8-202ENST00000629247 1058 ntBASIC19.39■□□□□ 0.69
CPEB3Q8NE35 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CPEB3Q8NE35 AC008406.3-201ENST00000620001 1374 ntBASIC19.39■□□□□ 0.69
CPEB3Q8NE35 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPEB3Q8NE35 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CPEB3Q8NE35 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPEB3Q8NE35 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.39■□□□□ 0.69
CPEB3Q8NE35 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPEB3Q8NE35 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPEB3Q8NE35 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPEB3Q8NE35 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.38■□□□□ 0.69
CPEB3Q8NE35 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPEB3Q8NE35 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPEB3Q8NE35 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.38■□□□□ 0.69
CPEB3Q8NE35 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.38■□□□□ 0.69
CPEB3Q8NE35 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.38■□□□□ 0.69
CPEB3Q8NE35 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPEB3Q8NE35 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.38■□□□□ 0.69
CPEB3Q8NE35 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPEB3Q8NE35 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.38■□□□□ 0.69
CPEB3Q8NE35 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.38■□□□□ 0.69
CPEB3Q8NE35 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPEB3Q8NE35 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CPEB3Q8NE35 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.37■□□□□ 0.69
CPEB3Q8NE35 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CPEB3Q8NE35 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.37■□□□□ 0.69
CPEB3Q8NE35 AC006455.2-201ENST00000429931 906 ntBASIC19.37■□□□□ 0.69
CPEB3Q8NE35 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.37■□□□□ 0.69
CPEB3Q8NE35 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.37■□□□□ 0.69
CPEB3Q8NE35 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.37■□□□□ 0.69
CPEB3Q8NE35 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPEB3Q8NE35 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPEB3Q8NE35 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.37■□□□□ 0.69
CPEB3Q8NE35 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.37■□□□□ 0.69
CPEB3Q8NE35 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPEB3Q8NE35 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPEB3Q8NE35 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPEB3Q8NE35 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPEB3Q8NE35 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPEB3Q8NE35 AL136116.3-201ENST00000402907 1138 ntBASIC19.36■□□□□ 0.69
CPEB3Q8NE35 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPEB3Q8NE35 AC009086.3-201ENST00000623486 1008 ntBASIC19.36■□□□□ 0.69
CPEB3Q8NE35 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPEB3Q8NE35 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CPEB3Q8NE35 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.36■□□□□ 0.69
CPEB3Q8NE35 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPEB3Q8NE35 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPEB3Q8NE35 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.35■□□□□ 0.69
CPEB3Q8NE35 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.35■□□□□ 0.69
CPEB3Q8NE35 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.35■□□□□ 0.69
CPEB3Q8NE35 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPEB3Q8NE35 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.35■□□□□ 0.69
CPEB3Q8NE35 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPEB3Q8NE35 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.35■□□□□ 0.69
CPEB3Q8NE35 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPEB3Q8NE35 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPEB3Q8NE35 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CPEB3Q8NE35 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.35■□□□□ 0.69
CPEB3Q8NE35 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
CPEB3Q8NE35 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CPEB3Q8NE35 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.35■□□□□ 0.69
CPEB3Q8NE35 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CPEB3Q8NE35 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.34■□□□□ 0.69
CPEB3Q8NE35 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPEB3Q8NE35 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CPEB3Q8NE35 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPEB3Q8NE35 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPEB3Q8NE35 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms