Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF248Q8NDW4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.23■□□□□ 0.99
ZNF248Q8NDW4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.23■□□□□ 0.99
ZNF248Q8NDW4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF248Q8NDW4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ZNF248Q8NDW4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF248Q8NDW4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF248Q8NDW4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.22■□□□□ 0.99
ZNF248Q8NDW4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF248Q8NDW4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF248Q8NDW4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ZNF248Q8NDW4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.22■□□□□ 0.99
ZNF248Q8NDW4 AC080038.1-201ENST00000611274 1154 ntBASIC21.22■□□□□ 0.99
ZNF248Q8NDW4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF248Q8NDW4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF248Q8NDW4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ZNF248Q8NDW4 AP003733.4-201ENST00000623785 1697 ntBASIC21.21■□□□□ 0.99
ZNF248Q8NDW4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF248Q8NDW4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF248Q8NDW4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF248Q8NDW4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
ZNF248Q8NDW4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ZNF248Q8NDW4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ZNF248Q8NDW4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF248Q8NDW4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF248Q8NDW4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ZNF248Q8NDW4 AC138932.3-201ENST00000567634 1902 ntBASIC21.2■□□□□ 0.98
ZNF248Q8NDW4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.2■□□□□ 0.98
ZNF248Q8NDW4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF248Q8NDW4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ZNF248Q8NDW4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF248Q8NDW4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF248Q8NDW4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ZNF248Q8NDW4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
ZNF248Q8NDW4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.19■□□□□ 0.98
ZNF248Q8NDW4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.19■□□□□ 0.98
ZNF248Q8NDW4 MIR6089-201ENST00000616698 64 ntBASIC21.19■□□□□ 0.98
ZNF248Q8NDW4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.19■□□□□ 0.98
ZNF248Q8NDW4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF248Q8NDW4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ZNF248Q8NDW4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF248Q8NDW4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF248Q8NDW4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF248Q8NDW4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF248Q8NDW4 AC135731.1-201ENST00000569415 2548 ntBASIC21.18■□□□□ 0.98
ZNF248Q8NDW4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF248Q8NDW4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF248Q8NDW4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF248Q8NDW4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.18■□□□□ 0.98
ZNF248Q8NDW4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF248Q8NDW4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ZNF248Q8NDW4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.18■□□□□ 0.98
ZNF248Q8NDW4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF248Q8NDW4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.18■□□□□ 0.98
ZNF248Q8NDW4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ZNF248Q8NDW4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF248Q8NDW4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.17■□□□□ 0.98
ZNF248Q8NDW4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF248Q8NDW4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF248Q8NDW4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
ZNF248Q8NDW4 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.17■□□□□ 0.98
ZNF248Q8NDW4 AC016769.1-201ENST00000409132 1010 ntBASIC21.17■□□□□ 0.98
ZNF248Q8NDW4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ZNF248Q8NDW4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF248Q8NDW4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF248Q8NDW4 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.17■□□□□ 0.98
ZNF248Q8NDW4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.17■□□□□ 0.98
ZNF248Q8NDW4 AL161729.1-201ENST00000604104 1402 ntBASIC21.17■□□□□ 0.98
ZNF248Q8NDW4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF248Q8NDW4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF248Q8NDW4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF248Q8NDW4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF248Q8NDW4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.16■□□□□ 0.98
ZNF248Q8NDW4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF248Q8NDW4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF248Q8NDW4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF248Q8NDW4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ZNF248Q8NDW4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF248Q8NDW4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF248Q8NDW4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
ZNF248Q8NDW4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF248Q8NDW4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF248Q8NDW4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ZNF248Q8NDW4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF248Q8NDW4 AC133637.1-201ENST00000624115 1537 ntBASIC21.15■□□□□ 0.98
ZNF248Q8NDW4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ZNF248Q8NDW4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF248Q8NDW4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.15■□□□□ 0.98
ZNF248Q8NDW4 AC006015.1-201ENST00000429970 570 ntBASIC21.15■□□□□ 0.98
ZNF248Q8NDW4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF248Q8NDW4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF248Q8NDW4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF248Q8NDW4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF248Q8NDW4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF248Q8NDW4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF248Q8NDW4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF248Q8NDW4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.14■□□□□ 0.98
ZNF248Q8NDW4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
ZNF248Q8NDW4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
ZNF248Q8NDW4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms