Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB42Q8N4Z0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB42Q8N4Z0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB42Q8N4Z0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB42Q8N4Z0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB42Q8N4Z0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.59■■□□□ 1.05
RAB42Q8N4Z0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.59■■□□□ 1.05
RAB42Q8N4Z0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB42Q8N4Z0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB42Q8N4Z0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RAB42Q8N4Z0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RAB42Q8N4Z0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.59■■□□□ 1.05
RAB42Q8N4Z0 pRNA.6-201ENST00000610482 90 ntBASIC21.59■■□□□ 1.05
RAB42Q8N4Z0 pRNA.5-201ENST00000612139 90 ntBASIC21.59■■□□□ 1.05
RAB42Q8N4Z0 pRNA.11-201ENST00000618423 90 ntBASIC21.59■■□□□ 1.05
RAB42Q8N4Z0 pRNA.13-201ENST00000619112 90 ntBASIC21.59■■□□□ 1.05
RAB42Q8N4Z0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.59■■□□□ 1.05
RAB42Q8N4Z0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB42Q8N4Z0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RAB42Q8N4Z0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB42Q8N4Z0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.59■■□□□ 1.05
RAB42Q8N4Z0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RAB42Q8N4Z0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.58■■□□□ 1.05
RAB42Q8N4Z0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
RAB42Q8N4Z0 DUSP8P5-201ENST00000422884 1815 ntBASIC21.58■■□□□ 1.05
RAB42Q8N4Z0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RAB42Q8N4Z0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAB42Q8N4Z0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
RAB42Q8N4Z0 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.58■■□□□ 1.05
RAB42Q8N4Z0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.58■■□□□ 1.05
RAB42Q8N4Z0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.58■■□□□ 1.05
RAB42Q8N4Z0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.58■■□□□ 1.05
RAB42Q8N4Z0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
RAB42Q8N4Z0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RAB42Q8N4Z0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RAB42Q8N4Z0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
RAB42Q8N4Z0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.58■■□□□ 1.04
RAB42Q8N4Z0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.58■■□□□ 1.04
RAB42Q8N4Z0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.58■■□□□ 1.04
RAB42Q8N4Z0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
RAB42Q8N4Z0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RAB42Q8N4Z0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.57■■□□□ 1.04
RAB42Q8N4Z0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB42Q8N4Z0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB42Q8N4Z0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAB42Q8N4Z0 AC006455.2-201ENST00000429931 906 ntBASIC21.57■■□□□ 1.04
RAB42Q8N4Z0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.57■■□□□ 1.04
RAB42Q8N4Z0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB42Q8N4Z0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.57■■□□□ 1.04
RAB42Q8N4Z0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB42Q8N4Z0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAB42Q8N4Z0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.57■■□□□ 1.04
RAB42Q8N4Z0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB42Q8N4Z0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB42Q8N4Z0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB42Q8N4Z0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB42Q8N4Z0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB42Q8N4Z0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.56■■□□□ 1.04
RAB42Q8N4Z0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.56■■□□□ 1.04
RAB42Q8N4Z0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.56■■□□□ 1.04
RAB42Q8N4Z0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB42Q8N4Z0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAB42Q8N4Z0 AL499627.2-201ENST00000606283 725 ntBASIC21.56■■□□□ 1.04
RAB42Q8N4Z0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB42Q8N4Z0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
RAB42Q8N4Z0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB42Q8N4Z0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB42Q8N4Z0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB42Q8N4Z0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB42Q8N4Z0 DUSP8P3-201ENST00000399571 1760 ntBASIC21.56■■□□□ 1.04
RAB42Q8N4Z0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB42Q8N4Z0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
RAB42Q8N4Z0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB42Q8N4Z0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB42Q8N4Z0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.55■■□□□ 1.04
RAB42Q8N4Z0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.55■■□□□ 1.04
RAB42Q8N4Z0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RAB42Q8N4Z0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.55■■□□□ 1.04
RAB42Q8N4Z0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RAB42Q8N4Z0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAB42Q8N4Z0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB42Q8N4Z0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAB42Q8N4Z0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RAB42Q8N4Z0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.54■■□□□ 1.04
RAB42Q8N4Z0 MIR3181-201ENST00000578512 73 ntBASIC21.54■■□□□ 1.04
RAB42Q8N4Z0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RAB42Q8N4Z0 AC011298.3-201ENST00000615796 283 ntBASIC21.54■■□□□ 1.04
RAB42Q8N4Z0 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.54■■□□□ 1.04
RAB42Q8N4Z0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB42Q8N4Z0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB42Q8N4Z0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.54■■□□□ 1.04
RAB42Q8N4Z0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB42Q8N4Z0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.54■■□□□ 1.04
RAB42Q8N4Z0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.53■■□□□ 1.04
RAB42Q8N4Z0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB42Q8N4Z0 UNC93B3-201ENST00000308076 687 ntBASIC21.53■■□□□ 1.04
RAB42Q8N4Z0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
RAB42Q8N4Z0 SERBP1P1-201ENST00000396021 1160 ntBASIC21.53■■□□□ 1.04
RAB42Q8N4Z0 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.53■■□□□ 1.04
RAB42Q8N4Z0 AC096631.2-201ENST00000436136 790 ntBASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms