Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RP1L1Q8IWN7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RP1L1Q8IWN7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RP1L1Q8IWN7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.13■□□□□ 0.81
RP1L1Q8IWN7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.13■□□□□ 0.81
RP1L1Q8IWN7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.12■□□□□ 0.81
RP1L1Q8IWN7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RP1L1Q8IWN7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RP1L1Q8IWN7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RP1L1Q8IWN7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RP1L1Q8IWN7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RP1L1Q8IWN7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RP1L1Q8IWN7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RP1L1Q8IWN7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RP1L1Q8IWN7 CROCCP5-201ENST00000436658 830 ntBASIC20.12■□□□□ 0.81
RP1L1Q8IWN7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.12■□□□□ 0.81
RP1L1Q8IWN7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.12■□□□□ 0.81
RP1L1Q8IWN7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
RP1L1Q8IWN7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.11■□□□□ 0.81
RP1L1Q8IWN7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.11■□□□□ 0.81
RP1L1Q8IWN7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.11■□□□□ 0.81
RP1L1Q8IWN7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.11■□□□□ 0.81
RP1L1Q8IWN7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.11■□□□□ 0.81
RP1L1Q8IWN7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.11■□□□□ 0.81
RP1L1Q8IWN7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RP1L1Q8IWN7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RP1L1Q8IWN7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RP1L1Q8IWN7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.11■□□□□ 0.81
RP1L1Q8IWN7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RP1L1Q8IWN7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.11■□□□□ 0.81
RP1L1Q8IWN7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 AC004854.2-201ENST00000608450 1441 ntBASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 AC133637.1-201ENST00000624115 1537 ntBASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 AC141586.4-201ENST00000624558 1573 ntBASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 KRT19P1-201ENST00000405746 1186 ntBASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 NCF1B-203ENST00000435988 1254 ntBASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RP1L1Q8IWN7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RP1L1Q8IWN7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.09■□□□□ 0.81
RP1L1Q8IWN7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
RP1L1Q8IWN7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.09■□□□□ 0.81
RP1L1Q8IWN7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RP1L1Q8IWN7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.09■□□□□ 0.81
RP1L1Q8IWN7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RP1L1Q8IWN7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RP1L1Q8IWN7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RP1L1Q8IWN7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RP1L1Q8IWN7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RP1L1Q8IWN7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.09■□□□□ 0.81
RP1L1Q8IWN7 AC093827.2-201ENST00000512654 315 ntBASIC20.09■□□□□ 0.81
RP1L1Q8IWN7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.09■□□□□ 0.81
RP1L1Q8IWN7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.09■□□□□ 0.81
RP1L1Q8IWN7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.08■□□□□ 0.81
RP1L1Q8IWN7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RP1L1Q8IWN7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
RP1L1Q8IWN7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
RP1L1Q8IWN7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RP1L1Q8IWN7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RP1L1Q8IWN7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.08■□□□□ 0.81
RP1L1Q8IWN7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.08■□□□□ 0.81
RP1L1Q8IWN7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RP1L1Q8IWN7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RP1L1Q8IWN7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.08■□□□□ 0.8
RP1L1Q8IWN7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RP1L1Q8IWN7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RP1L1Q8IWN7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RP1L1Q8IWN7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RP1L1Q8IWN7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.08■□□□□ 0.8
RP1L1Q8IWN7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RP1L1Q8IWN7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RP1L1Q8IWN7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RP1L1Q8IWN7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.08■□□□□ 0.8
RP1L1Q8IWN7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
RP1L1Q8IWN7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.08■□□□□ 0.8
RP1L1Q8IWN7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.07■□□□□ 0.8
RP1L1Q8IWN7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RP1L1Q8IWN7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
RP1L1Q8IWN7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RP1L1Q8IWN7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RP1L1Q8IWN7 AC006970.2-201ENST00000450065 779 ntBASIC20.07■□□□□ 0.8
RP1L1Q8IWN7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms