Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.64■□□□□ 0.73
LINC00346Q8IVM7 EP400NL-214ENST00000641289 2402 ntBASIC19.64■□□□□ 0.73
LINC00346Q8IVM7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC00346Q8IVM7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC00346Q8IVM7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LINC00346Q8IVM7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC00346Q8IVM7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC00346Q8IVM7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC00346Q8IVM7 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.63■□□□□ 0.73
LINC00346Q8IVM7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC00346Q8IVM7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
LINC00346Q8IVM7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LINC00346Q8IVM7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LINC00346Q8IVM7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC00346Q8IVM7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.62■□□□□ 0.73
LINC00346Q8IVM7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.62■□□□□ 0.73
LINC00346Q8IVM7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.62■□□□□ 0.73
LINC00346Q8IVM7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC00346Q8IVM7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC00346Q8IVM7 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.62■□□□□ 0.73
LINC00346Q8IVM7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC00346Q8IVM7 GUSBP5-202ENST00000510805 1989 ntBASIC19.62■□□□□ 0.73
LINC00346Q8IVM7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINC00346Q8IVM7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC00346Q8IVM7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LINC00346Q8IVM7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00346Q8IVM7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00346Q8IVM7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.61■□□□□ 0.73
LINC00346Q8IVM7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00346Q8IVM7 AC010997.5-201ENST00000609182 354 ntBASIC19.61■□□□□ 0.73
LINC00346Q8IVM7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00346Q8IVM7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.61■□□□□ 0.73
LINC00346Q8IVM7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LINC00346Q8IVM7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00346Q8IVM7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00346Q8IVM7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LINC00346Q8IVM7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00346Q8IVM7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.6■□□□□ 0.73
LINC00346Q8IVM7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00346Q8IVM7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00346Q8IVM7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.6■□□□□ 0.73
LINC00346Q8IVM7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00346Q8IVM7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LINC00346Q8IVM7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LINC00346Q8IVM7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00346Q8IVM7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.59■□□□□ 0.73
LINC00346Q8IVM7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00346Q8IVM7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LINC00346Q8IVM7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00346Q8IVM7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.59■□□□□ 0.73
LINC00346Q8IVM7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00346Q8IVM7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00346Q8IVM7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00346Q8IVM7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00346Q8IVM7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.59■□□□□ 0.73
LINC00346Q8IVM7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.59■□□□□ 0.73
LINC00346Q8IVM7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00346Q8IVM7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00346Q8IVM7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00346Q8IVM7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00346Q8IVM7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.59■□□□□ 0.73
LINC00346Q8IVM7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00346Q8IVM7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LINC00346Q8IVM7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LINC00346Q8IVM7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.58■□□□□ 0.73
LINC00346Q8IVM7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.58■□□□□ 0.73
LINC00346Q8IVM7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LINC00346Q8IVM7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.58■□□□□ 0.73
LINC00346Q8IVM7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.58■□□□□ 0.72
LINC00346Q8IVM7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.58■□□□□ 0.72
LINC00346Q8IVM7 LINC01529-204ENST00000636474 1715 ntBASIC19.58■□□□□ 0.72
LINC00346Q8IVM7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.58■□□□□ 0.72
LINC00346Q8IVM7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LINC00346Q8IVM7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LINC00346Q8IVM7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LINC00346Q8IVM7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.57■□□□□ 0.72
LINC00346Q8IVM7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LINC00346Q8IVM7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.57■□□□□ 0.72
LINC00346Q8IVM7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LINC00346Q8IVM7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LINC00346Q8IVM7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LINC00346Q8IVM7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
LINC00346Q8IVM7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LINC00346Q8IVM7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LINC00346Q8IVM7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LINC00346Q8IVM7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.57■□□□□ 0.72
LINC00346Q8IVM7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LINC00346Q8IVM7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.57■□□□□ 0.72
LINC00346Q8IVM7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
LINC00346Q8IVM7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC00346Q8IVM7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC00346Q8IVM7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC00346Q8IVM7 AC009102.2-201ENST00000606772 1639 ntBASIC19.56■□□□□ 0.72
LINC00346Q8IVM7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.56■□□□□ 0.72
LINC00346Q8IVM7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC00346Q8IVM7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.56■□□□□ 0.72
LINC00346Q8IVM7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.56■□□□□ 0.72
LINC00346Q8IVM7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC00346Q8IVM7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.56■□□□□ 0.72
LINC00346Q8IVM7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms