Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.54■□□□□ 0.88
VRK2Q86Y07 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VRK2Q86Y07 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VRK2Q86Y07 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VRK2Q86Y07 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.54■□□□□ 0.88
VRK2Q86Y07 AC010997.5-201ENST00000609182 354 ntBASIC20.54■□□□□ 0.88
VRK2Q86Y07 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VRK2Q86Y07 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.54■□□□□ 0.88
VRK2Q86Y07 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VRK2Q86Y07 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VRK2Q86Y07 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.54■□□□□ 0.88
VRK2Q86Y07 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
VRK2Q86Y07 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VRK2Q86Y07 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.54■□□□□ 0.88
VRK2Q86Y07 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VRK2Q86Y07 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.53■□□□□ 0.88
VRK2Q86Y07 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VRK2Q86Y07 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
VRK2Q86Y07 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.53■□□□□ 0.88
VRK2Q86Y07 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
VRK2Q86Y07 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VRK2Q86Y07 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.53■□□□□ 0.88
VRK2Q86Y07 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VRK2Q86Y07 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VRK2Q86Y07 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.53■□□□□ 0.88
VRK2Q86Y07 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
VRK2Q86Y07 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VRK2Q86Y07 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VRK2Q86Y07 LINC01529-204ENST00000636474 1715 ntBASIC20.53■□□□□ 0.88
VRK2Q86Y07 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VRK2Q86Y07 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VRK2Q86Y07 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
VRK2Q86Y07 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VRK2Q86Y07 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VRK2Q86Y07 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.52■□□□□ 0.88
VRK2Q86Y07 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.52■□□□□ 0.88
VRK2Q86Y07 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VRK2Q86Y07 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.52■□□□□ 0.88
VRK2Q86Y07 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
VRK2Q86Y07 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VRK2Q86Y07 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
VRK2Q86Y07 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
VRK2Q86Y07 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VRK2Q86Y07 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.51■□□□□ 0.87
VRK2Q86Y07 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
VRK2Q86Y07 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
VRK2Q86Y07 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VRK2Q86Y07 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VRK2Q86Y07 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VRK2Q86Y07 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
VRK2Q86Y07 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
VRK2Q86Y07 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VRK2Q86Y07 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VRK2Q86Y07 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VRK2Q86Y07 AC009102.2-201ENST00000606772 1639 ntBASIC20.5■□□□□ 0.87
VRK2Q86Y07 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.5■□□□□ 0.87
VRK2Q86Y07 ESRRAP2-201ENST00000418437 1549 ntBASIC20.5■□□□□ 0.87
VRK2Q86Y07 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.5■□□□□ 0.87
VRK2Q86Y07 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.5■□□□□ 0.87
VRK2Q86Y07 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
VRK2Q86Y07 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
VRK2Q86Y07 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
VRK2Q86Y07 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VRK2Q86Y07 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VRK2Q86Y07 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
VRK2Q86Y07 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VRK2Q86Y07 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VRK2Q86Y07 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VRK2Q86Y07 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
VRK2Q86Y07 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
VRK2Q86Y07 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
VRK2Q86Y07 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
VRK2Q86Y07 FP325331.1-202ENST00000623531 1380 ntBASIC20.49■□□□□ 0.87
VRK2Q86Y07 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
VRK2Q86Y07 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VRK2Q86Y07 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
VRK2Q86Y07 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VRK2Q86Y07 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.49■□□□□ 0.87
VRK2Q86Y07 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.49■□□□□ 0.87
VRK2Q86Y07 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.49■□□□□ 0.87
VRK2Q86Y07 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
VRK2Q86Y07 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VRK2Q86Y07 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
VRK2Q86Y07 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VRK2Q86Y07 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
VRK2Q86Y07 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.49■□□□□ 0.87
VRK2Q86Y07 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VRK2Q86Y07 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VRK2Q86Y07 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.48■□□□□ 0.87
VRK2Q86Y07 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
VRK2Q86Y07 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
VRK2Q86Y07 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VRK2Q86Y07 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VRK2Q86Y07 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VRK2Q86Y07 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.48■□□□□ 0.87
VRK2Q86Y07 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VRK2Q86Y07 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
VRK2Q86Y07 UNC93B8-201ENST00000511903 705 ntBASIC20.48■□□□□ 0.87
VRK2Q86Y07 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VRK2Q86Y07 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms