Protein–RNA interactions for Protein: Q86X29

LSR, Lipolysis-stimulated lipoprotein receptor, humanhuman

Predicted RBP Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSRQ86X29 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSRQ86X29 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LSRQ86X29 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LSRQ86X29 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LSRQ86X29 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LSRQ86X29 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSRQ86X29 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSRQ86X29 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LSRQ86X29 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LSRQ86X29 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSRQ86X29 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LSRQ86X29 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LSRQ86X29 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LSRQ86X29 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSRQ86X29 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LSRQ86X29 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.36■□□□□ 0.85
LSRQ86X29 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.36■□□□□ 0.85
LSRQ86X29 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.36■□□□□ 0.85
LSRQ86X29 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LSRQ86X29 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LSRQ86X29 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSRQ86X29 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSRQ86X29 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSRQ86X29 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LSRQ86X29 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSRQ86X29 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSRQ86X29 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSRQ86X29 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
LSRQ86X29 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.35■□□□□ 0.85
LSRQ86X29 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
LSRQ86X29 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSRQ86X29 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSRQ86X29 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.35■□□□□ 0.85
LSRQ86X29 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LSRQ86X29 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSRQ86X29 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LSRQ86X29 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.34■□□□□ 0.85
LSRQ86X29 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
LSRQ86X29 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
LSRQ86X29 KRT16P3-201ENST00000439127 1283 ntBASIC20.34■□□□□ 0.85
LSRQ86X29 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LSRQ86X29 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSRQ86X29 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.34■□□□□ 0.85
LSRQ86X29 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSRQ86X29 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LSRQ86X29 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.34■□□□□ 0.85
LSRQ86X29 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.33■□□□□ 0.85
LSRQ86X29 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSRQ86X29 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSRQ86X29 MIR6722-201ENST00000617286 78 ntBASIC20.33■□□□□ 0.85
LSRQ86X29 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LSRQ86X29 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LSRQ86X29 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LSRQ86X29 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
LSRQ86X29 AC012676.1-201ENST00000574705 1949 ntBASIC20.33■□□□□ 0.84
LSRQ86X29 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSRQ86X29 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSRQ86X29 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSRQ86X29 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
LSRQ86X29 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSRQ86X29 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.32■□□□□ 0.84
LSRQ86X29 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LSRQ86X29 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LSRQ86X29 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LSRQ86X29 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSRQ86X29 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.32■□□□□ 0.84
LSRQ86X29 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.32■□□□□ 0.84
LSRQ86X29 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.32■□□□□ 0.84
LSRQ86X29 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.32■□□□□ 0.84
LSRQ86X29 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
LSRQ86X29 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LSRQ86X29 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSRQ86X29 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSRQ86X29 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LSRQ86X29 AC005703.6-201ENST00000623265 1329 ntBASIC20.31■□□□□ 0.84
LSRQ86X29 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSRQ86X29 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LSRQ86X29 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.31■□□□□ 0.84
LSRQ86X29 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSRQ86X29 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
LSRQ86X29 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LSRQ86X29 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LSRQ86X29 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.31■□□□□ 0.84
LSRQ86X29 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.31■□□□□ 0.84
LSRQ86X29 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LSRQ86X29 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
LSRQ86X29 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSRQ86X29 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSRQ86X29 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
LSRQ86X29 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.3■□□□□ 0.84
LSRQ86X29 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
LSRQ86X29 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSRQ86X29 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSRQ86X29 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.3■□□□□ 0.84
LSRQ86X29 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSRQ86X29 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LSRQ86X29 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSRQ86X29 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.3■□□□□ 0.84
LSRQ86X29 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSRQ86X29 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms