Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX53Q86TM3 KRT18P14-201ENST00000534205 1250 ntBASIC23.76■■□□□ 1.39
DDX53Q86TM3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX53Q86TM3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX53Q86TM3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX53Q86TM3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX53Q86TM3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX53Q86TM3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX53Q86TM3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX53Q86TM3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DDX53Q86TM3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.75■■□□□ 1.39
DDX53Q86TM3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
DDX53Q86TM3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
DDX53Q86TM3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.75■■□□□ 1.39
DDX53Q86TM3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX53Q86TM3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
DDX53Q86TM3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX53Q86TM3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.75■■□□□ 1.39
DDX53Q86TM3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DDX53Q86TM3 NTF6G-201ENST00000591094 616 ntBASIC23.75■■□□□ 1.39
DDX53Q86TM3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX53Q86TM3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX53Q86TM3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.75■■□□□ 1.39
DDX53Q86TM3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX53Q86TM3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.75■■□□□ 1.39
DDX53Q86TM3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.74■■□□□ 1.39
DDX53Q86TM3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
DDX53Q86TM3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX53Q86TM3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.74■■□□□ 1.39
DDX53Q86TM3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.74■■□□□ 1.39
DDX53Q86TM3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
DDX53Q86TM3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
DDX53Q86TM3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX53Q86TM3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.74■■□□□ 1.39
DDX53Q86TM3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX53Q86TM3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX53Q86TM3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX53Q86TM3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX53Q86TM3 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.73■■□□□ 1.39
DDX53Q86TM3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.73■■□□□ 1.39
DDX53Q86TM3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.73■■□□□ 1.39
DDX53Q86TM3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX53Q86TM3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
DDX53Q86TM3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.72■■□□□ 1.39
DDX53Q86TM3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX53Q86TM3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX53Q86TM3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX53Q86TM3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DDX53Q86TM3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
DDX53Q86TM3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
DDX53Q86TM3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
DDX53Q86TM3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.72■■□□□ 1.39
DDX53Q86TM3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.72■■□□□ 1.39
DDX53Q86TM3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DDX53Q86TM3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX53Q86TM3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX53Q86TM3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX53Q86TM3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.71■■□□□ 1.39
DDX53Q86TM3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX53Q86TM3 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.71■■□□□ 1.39
DDX53Q86TM3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX53Q86TM3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.71■■□□□ 1.39
DDX53Q86TM3 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.71■■□□□ 1.39
DDX53Q86TM3 AC004911.1-201ENST00000416316 871 ntBASIC23.71■■□□□ 1.39
DDX53Q86TM3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
DDX53Q86TM3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
DDX53Q86TM3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.71■■□□□ 1.39
DDX53Q86TM3 AC105233.4-201ENST00000642045 216 ntBASIC23.71■■□□□ 1.39
DDX53Q86TM3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX53Q86TM3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.71■■□□□ 1.39
DDX53Q86TM3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.7■■□□□ 1.39
DDX53Q86TM3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DDX53Q86TM3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.7■■□□□ 1.38
DDX53Q86TM3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.7■■□□□ 1.38
DDX53Q86TM3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.7■■□□□ 1.38
DDX53Q86TM3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.7■■□□□ 1.38
DDX53Q86TM3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DDX53Q86TM3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX53Q86TM3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX53Q86TM3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX53Q86TM3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.69■■□□□ 1.38
DDX53Q86TM3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
DDX53Q86TM3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX53Q86TM3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX53Q86TM3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX53Q86TM3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX53Q86TM3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX53Q86TM3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
DDX53Q86TM3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.69■■□□□ 1.38
DDX53Q86TM3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.69■■□□□ 1.38
DDX53Q86TM3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.69■■□□□ 1.38
DDX53Q86TM3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DDX53Q86TM3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.69■■□□□ 1.38
DDX53Q86TM3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX53Q86TM3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX53Q86TM3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
DDX53Q86TM3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX53Q86TM3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
DDX53Q86TM3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX53Q86TM3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms