Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
SYCE2Q6PIF2 AC016769.1-201ENST00000409132 1010 ntBASIC23.4■■□□□ 1.34
SYCE2Q6PIF2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.4■■□□□ 1.34
SYCE2Q6PIF2 AC137761.2-201ENST00000561729 223 ntBASIC23.4■■□□□ 1.34
SYCE2Q6PIF2 AC145350.3-201ENST00000569033 163 ntBASIC23.4■■□□□ 1.34
SYCE2Q6PIF2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.4■■□□□ 1.34
SYCE2Q6PIF2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SYCE2Q6PIF2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.4■■□□□ 1.34
SYCE2Q6PIF2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SYCE2Q6PIF2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.4■■□□□ 1.34
SYCE2Q6PIF2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.4■■□□□ 1.34
SYCE2Q6PIF2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.4■■□□□ 1.34
SYCE2Q6PIF2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
SYCE2Q6PIF2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SYCE2Q6PIF2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SYCE2Q6PIF2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
SYCE2Q6PIF2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SYCE2Q6PIF2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.39■■□□□ 1.33
SYCE2Q6PIF2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
SYCE2Q6PIF2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SYCE2Q6PIF2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE2Q6PIF2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE2Q6PIF2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.38■■□□□ 1.33
SYCE2Q6PIF2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE2Q6PIF2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.38■■□□□ 1.33
SYCE2Q6PIF2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE2Q6PIF2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE2Q6PIF2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE2Q6PIF2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE2Q6PIF2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.38■■□□□ 1.33
SYCE2Q6PIF2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE2Q6PIF2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.38■■□□□ 1.33
SYCE2Q6PIF2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
SYCE2Q6PIF2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE2Q6PIF2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE2Q6PIF2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SYCE2Q6PIF2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
SYCE2Q6PIF2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE2Q6PIF2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SYCE2Q6PIF2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SYCE2Q6PIF2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SYCE2Q6PIF2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
SYCE2Q6PIF2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.37■■□□□ 1.33
SYCE2Q6PIF2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SYCE2Q6PIF2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
SYCE2Q6PIF2 TPRG1LP1-201ENST00000598702 760 ntBASIC23.37■■□□□ 1.33
SYCE2Q6PIF2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SYCE2Q6PIF2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SYCE2Q6PIF2 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.37■■□□□ 1.33
SYCE2Q6PIF2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
SYCE2Q6PIF2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.36■■□□□ 1.33
SYCE2Q6PIF2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SYCE2Q6PIF2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.36■■□□□ 1.33
SYCE2Q6PIF2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SYCE2Q6PIF2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.36■■□□□ 1.33
SYCE2Q6PIF2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.36■■□□□ 1.33
SYCE2Q6PIF2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.36■■□□□ 1.33
SYCE2Q6PIF2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.36■■□□□ 1.33
SYCE2Q6PIF2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.36■■□□□ 1.33
SYCE2Q6PIF2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.36■■□□□ 1.33
SYCE2Q6PIF2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.36■■□□□ 1.33
SYCE2Q6PIF2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.36■■□□□ 1.33
SYCE2Q6PIF2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SYCE2Q6PIF2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.36■■□□□ 1.33
SYCE2Q6PIF2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.36■■□□□ 1.33
SYCE2Q6PIF2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.36■■□□□ 1.33
SYCE2Q6PIF2 AC145676.1-201ENST00000514988 2004 ntBASIC23.35■■□□□ 1.33
SYCE2Q6PIF2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.35■■□□□ 1.33
SYCE2Q6PIF2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SYCE2Q6PIF2 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.35■■□□□ 1.33
SYCE2Q6PIF2 AC026185.1-201ENST00000445748 174 ntBASIC23.35■■□□□ 1.33
SYCE2Q6PIF2 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.35■■□□□ 1.33
SYCE2Q6PIF2 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.35■■□□□ 1.33
SYCE2Q6PIF2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.35■■□□□ 1.33
SYCE2Q6PIF2 AC104771.1-201ENST00000603335 964 ntBASIC23.35■■□□□ 1.33
SYCE2Q6PIF2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.35■■□□□ 1.33
SYCE2Q6PIF2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SYCE2Q6PIF2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.35■■□□□ 1.33
SYCE2Q6PIF2 AP004607.4-201ENST00000530158 1459 ntBASIC23.35■■□□□ 1.33
SYCE2Q6PIF2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.34■■□□□ 1.33
SYCE2Q6PIF2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.34■■□□□ 1.33
SYCE2Q6PIF2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SYCE2Q6PIF2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
SYCE2Q6PIF2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SYCE2Q6PIF2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SYCE2Q6PIF2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
SYCE2Q6PIF2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SYCE2Q6PIF2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.34■■□□□ 1.33
SYCE2Q6PIF2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.33■■□□□ 1.33
SYCE2Q6PIF2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SYCE2Q6PIF2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SYCE2Q6PIF2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SYCE2Q6PIF2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.33■■□□□ 1.33
SYCE2Q6PIF2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.33■■□□□ 1.33
SYCE2Q6PIF2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.33■■□□□ 1.33
SYCE2Q6PIF2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SYCE2Q6PIF2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.32
SYCE2Q6PIF2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.33■■□□□ 1.32
SYCE2Q6PIF2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.32■■□□□ 1.32
SYCE2Q6PIF2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms