Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PTCRAQ6ISU1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PTCRAQ6ISU1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PTCRAQ6ISU1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.26■■□□□ 1.31
PTCRAQ6ISU1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PTCRAQ6ISU1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PTCRAQ6ISU1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.25■■□□□ 1.31
PTCRAQ6ISU1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.25■■□□□ 1.31
PTCRAQ6ISU1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PTCRAQ6ISU1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PTCRAQ6ISU1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.25■■□□□ 1.31
PTCRAQ6ISU1 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.25■■□□□ 1.31
PTCRAQ6ISU1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.25■■□□□ 1.31
PTCRAQ6ISU1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.25■■□□□ 1.31
PTCRAQ6ISU1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PTCRAQ6ISU1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.24■■□□□ 1.31
PTCRAQ6ISU1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PTCRAQ6ISU1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PTCRAQ6ISU1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
PTCRAQ6ISU1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.24■■□□□ 1.31
PTCRAQ6ISU1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
PTCRAQ6ISU1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.24■■□□□ 1.31
PTCRAQ6ISU1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PTCRAQ6ISU1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PTCRAQ6ISU1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.23■■□□□ 1.31
PTCRAQ6ISU1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PTCRAQ6ISU1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PTCRAQ6ISU1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PTCRAQ6ISU1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
PTCRAQ6ISU1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.23■■□□□ 1.31
PTCRAQ6ISU1 AL050303.2-201ENST00000619798 666 ntBASIC23.23■■□□□ 1.31
PTCRAQ6ISU1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PTCRAQ6ISU1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PTCRAQ6ISU1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
PTCRAQ6ISU1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PTCRAQ6ISU1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.22■■□□□ 1.31
PTCRAQ6ISU1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.22■■□□□ 1.31
PTCRAQ6ISU1 AL138781.1-201ENST00000566567 1274 ntBASIC23.22■■□□□ 1.31
PTCRAQ6ISU1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.22■■□□□ 1.31
PTCRAQ6ISU1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.22■■□□□ 1.31
PTCRAQ6ISU1 AC008687.6-201ENST00000596318 630 ntBASIC23.22■■□□□ 1.31
PTCRAQ6ISU1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PTCRAQ6ISU1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PTCRAQ6ISU1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PTCRAQ6ISU1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCRAQ6ISU1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PTCRAQ6ISU1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PTCRAQ6ISU1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PTCRAQ6ISU1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCRAQ6ISU1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PTCRAQ6ISU1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.21■■□□□ 1.31
PTCRAQ6ISU1 BX005040.4-201ENST00000637145 1518 ntBASIC23.21■■□□□ 1.31
PTCRAQ6ISU1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCRAQ6ISU1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCRAQ6ISU1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.21■■□□□ 1.31
PTCRAQ6ISU1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.21■■□□□ 1.31
PTCRAQ6ISU1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PTCRAQ6ISU1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PTCRAQ6ISU1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
PTCRAQ6ISU1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PTCRAQ6ISU1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.2■■□□□ 1.3
PTCRAQ6ISU1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PTCRAQ6ISU1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.2■■□□□ 1.3
PTCRAQ6ISU1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.2■■□□□ 1.3
PTCRAQ6ISU1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PTCRAQ6ISU1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 GUSBP6-202ENST00000438529 1198 ntBASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 SLC7A5P2-201ENST00000553010 536 ntBASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 MFSD11-216ENST00000590393 1141 ntBASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCRAQ6ISU1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PTCRAQ6ISU1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTCRAQ6ISU1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTCRAQ6ISU1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PTCRAQ6ISU1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTCRAQ6ISU1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
PTCRAQ6ISU1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PTCRAQ6ISU1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PTCRAQ6ISU1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.18■■□□□ 1.3
PTCRAQ6ISU1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.18■■□□□ 1.3
PTCRAQ6ISU1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.18■■□□□ 1.3
PTCRAQ6ISU1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.18■■□□□ 1.3
PTCRAQ6ISU1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.18■■□□□ 1.3
PTCRAQ6ISU1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.17■■□□□ 1.3
PTCRAQ6ISU1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTCRAQ6ISU1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms