Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39BQ5VTQ0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39BQ5VTQ0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39BQ5VTQ0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39BQ5VTQ0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39BQ5VTQ0 UNC93B3-201ENST00000308076 687 ntBASIC23.11■■□□□ 1.29
TTC39BQ5VTQ0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39BQ5VTQ0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39BQ5VTQ0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
TTC39BQ5VTQ0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39BQ5VTQ0 FP325331.1-202ENST00000623531 1380 ntBASIC23.11■■□□□ 1.29
TTC39BQ5VTQ0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39BQ5VTQ0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.11■■□□□ 1.29
TTC39BQ5VTQ0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39BQ5VTQ0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39BQ5VTQ0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
TTC39BQ5VTQ0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39BQ5VTQ0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.1■■□□□ 1.29
TTC39BQ5VTQ0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.1■■□□□ 1.29
TTC39BQ5VTQ0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39BQ5VTQ0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39BQ5VTQ0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39BQ5VTQ0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
TTC39BQ5VTQ0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.09■■□□□ 1.29
TTC39BQ5VTQ0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.09■■□□□ 1.29
TTC39BQ5VTQ0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
TTC39BQ5VTQ0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC39BQ5VTQ0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
TTC39BQ5VTQ0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC39BQ5VTQ0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC39BQ5VTQ0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
TTC39BQ5VTQ0 AC133561.4-201ENST00000566112 224 ntBASIC23.09■■□□□ 1.29
TTC39BQ5VTQ0 AL136162.1-201ENST00000607711 1078 ntBASIC23.09■■□□□ 1.29
TTC39BQ5VTQ0 AC106739.1-201ENST00000617035 715 ntBASIC23.09■■□□□ 1.29
TTC39BQ5VTQ0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
TTC39BQ5VTQ0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TTC39BQ5VTQ0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC39BQ5VTQ0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TTC39BQ5VTQ0 AC135279.3-201ENST00000610945 1311 ntBASIC23.08■■□□□ 1.29
TTC39BQ5VTQ0 AC144652.1-201ENST00000609974 1624 ntBASIC23.08■■□□□ 1.29
TTC39BQ5VTQ0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TTC39BQ5VTQ0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TTC39BQ5VTQ0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TTC39BQ5VTQ0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
TTC39BQ5VTQ0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.08■■□□□ 1.29
TTC39BQ5VTQ0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TTC39BQ5VTQ0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TTC39BQ5VTQ0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TTC39BQ5VTQ0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.29
TTC39BQ5VTQ0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
TTC39BQ5VTQ0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
TTC39BQ5VTQ0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TTC39BQ5VTQ0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TTC39BQ5VTQ0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.07■■□□□ 1.28
TTC39BQ5VTQ0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TTC39BQ5VTQ0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.07■■□□□ 1.28
TTC39BQ5VTQ0 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.07■■□□□ 1.28
TTC39BQ5VTQ0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.07■■□□□ 1.28
TTC39BQ5VTQ0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.07■■□□□ 1.28
TTC39BQ5VTQ0 AC011298.3-201ENST00000615796 283 ntBASIC23.07■■□□□ 1.28
TTC39BQ5VTQ0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.07■■□□□ 1.28
TTC39BQ5VTQ0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TTC39BQ5VTQ0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
TTC39BQ5VTQ0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TTC39BQ5VTQ0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.06■■□□□ 1.28
TTC39BQ5VTQ0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
TTC39BQ5VTQ0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.06■■□□□ 1.28
TTC39BQ5VTQ0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TTC39BQ5VTQ0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TTC39BQ5VTQ0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TTC39BQ5VTQ0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
TTC39BQ5VTQ0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TTC39BQ5VTQ0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
TTC39BQ5VTQ0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TTC39BQ5VTQ0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TTC39BQ5VTQ0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TTC39BQ5VTQ0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TTC39BQ5VTQ0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TTC39BQ5VTQ0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.05■■□□□ 1.28
TTC39BQ5VTQ0 MIR638-201ENST00000385237 100 ntBASIC23.05■■□□□ 1.28
TTC39BQ5VTQ0 SERBP1P1-201ENST00000396021 1160 ntBASIC23.05■■□□□ 1.28
TTC39BQ5VTQ0 PBX2P1-201ENST00000493219 1291 ntBASIC23.05■■□□□ 1.28
TTC39BQ5VTQ0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TTC39BQ5VTQ0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.05■■□□□ 1.28
TTC39BQ5VTQ0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TTC39BQ5VTQ0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TTC39BQ5VTQ0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TTC39BQ5VTQ0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.04■■□□□ 1.28
TTC39BQ5VTQ0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TTC39BQ5VTQ0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TTC39BQ5VTQ0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TTC39BQ5VTQ0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TTC39BQ5VTQ0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TTC39BQ5VTQ0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.04■■□□□ 1.28
TTC39BQ5VTQ0 AC006455.2-201ENST00000429931 906 ntBASIC23.04■■□□□ 1.28
TTC39BQ5VTQ0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.04■■□□□ 1.28
TTC39BQ5VTQ0 DUX4L4-201ENST00000566884 1269 ntBASIC23.04■■□□□ 1.28
TTC39BQ5VTQ0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
TTC39BQ5VTQ0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TTC39BQ5VTQ0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms